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SCNpilot_solid_1_scaffold_531_23

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(23161..24078)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00037FCAFF similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 297.0
  • Bit_score: 413
  • Evalue 2.50e-112
  • rbh
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 69.0
  • Coverage: 297.0
  • Bit_score: 411
  • Evalue 1.60e-112
  • rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACS18294.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovo similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 297.0
  • Bit_score: 411
  • Evalue 7.80e-112

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGAACTTCATCTGGCTCGAGGATTTCCTGGCGCTGGCCGCGACGGGCAGTTTTTCGCGGGCGGCGGAGACCAGGCACAGTTCCCAGCCGGCGTTCAGCCGCCGTATCCGGGCGCTGGAAGCCTGGGTGGGAGCCGACCTGGTCGATCGCGGCACGCAGCCGGCCCGCCTGACCGAAGCCGGCGAGTGGTTCCGGGGCGAGGCGCAGGAGCTGCTGGCGCGCGTGGCCCGGGTGCCCGGCGATGCGAGACGGGTGGCCGAGACCAGCGCCGCGACCCTGCGCCTGGCGTCCACCCATGCGCTGTCGCTGACCTTCCTGCCCCGCTGGCTGCGCGGCCTCGAATCGGGCGCTCCCATCGGGCCGATCCAGCTGATGTCCGACGTTCTGCAGCGCTGCGAGGTCCTGATGCAGCAGGGGAAGGCGCAGTTCGTCCTGAGCCATGCGCATCCCAAGGTCCGGGGCGCGCTCGATTCGGATGCATACCTGTCGGCGCACGTGGGCGACGACGTGCTGATCCCGGTGTCCGCGCCCGATCCGCGCGGCGGCCCGCTGCATTCGCTGGACGCGGGGGCGGCCGTGCCCATCCTTCGGTACAGCGAGGAATCGGGCCTGGGGCGGATTCTTCAGGCGCGGCTGGGCGCGCGCCTGCGCAGGGGCGCCGCGCGTGTGGTCTTCACCGCGCATCTCGCCTCGGTGCTGCGCACCATGGCGCTCGATGGGCGGGGCGTCGCCTGGCTGCCGCGAACCCTGGTGGAAGAGGACCTTGCCGGCGGCCTGCTGGTGGCCGCGGCGGCCCGGGACTGGAGCATTCCCGTCGCGATCCGGCTGTACCGGGAACGGGATCTGGCGGGGAGGGCGGCCGAAGCGCTCTGGGAATCGGGGCTCGCGCTGTCCCGCCAGGCCGATCGCGCGGACTGA
PROTEIN sequence
Length: 306
MNFIWLEDFLALAATGSFSRAAETRHSSQPAFSRRIRALEAWVGADLVDRGTQPARLTEAGEWFRGEAQELLARVARVPGDARRVAETSAATLRLASTHALSLTFLPRWLRGLESGAPIGPIQLMSDVLQRCEVLMQQGKAQFVLSHAHPKVRGALDSDAYLSAHVGDDVLIPVSAPDPRGGPLHSLDAGAAVPILRYSEESGLGRILQARLGARLRRGAARVVFTAHLASVLRTMALDGRGVAWLPRTLVEEDLAGGLLVAAAARDWSIPVAIRLYRERDLAGRAAEALWESGLALSRQADRAD*