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SCNpilot_solid_1_scaffold_750_2

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(581..1294)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter ATP-binding protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003654159 similarity UNIREF
DB: UNIREF100
  • Identity: 62.7
  • Coverage: 236.0
  • Bit_score: 310
  • Evalue 1.80e-81
  • rbh
Branched-chain amino acid transport ATP-binding protein LivF similarity KEGG
DB: KEGG
  • Identity: 89.8
  • Coverage: 235.0
  • Bit_score: 423
  • Evalue 4.10e-116
  • rbh
Branched-chain amino acid transport ATP-binding protein LivF {ECO:0000313|EMBL:CDM22716.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castel similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 235.0
  • Bit_score: 423
  • Evalue 2.00e-115

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGAGCGAAAATCTGCTGAAGGTCGAGGACCTCGTGTCCGGCTATGGGCGCAGCCAGGTGCTGTACGGCATGCATCTGCAGATCGATGCGGGGCAATGCGTGACCTTGCTGGGCCGCAACGGCATGGGCAAGACCACGACCGTCAAGAACATCATGGGCATGCATCCGGCCTGGCAGGGCCAGGTGCGGTTCAAGGGCTTCGGCATCCAGAATCTGCCCAGCTACCGGGTGGCGCAGCGCGGCATCGGCCTGGTTCCGGAAGGCCGGCAGATCTTCCCCAACCTGTCGGTGGAGGAAAACCTGGTGGCGACGGCGGCCGACCGCCACAAGAAACGCAATCCCTGGACCTTGCAGCGCATCTATGAACTGTTCCCGCGCCTGCGGGAACGCGCCGGCAATTTCGGCAATCAGCTATCGGGCGGCGAGCAACAGATGCTGGCGATCAGCCGGGCTCTGATGACCAATCCCGAACTGCTGATTCTGGACGAAGCCACGGAAGGCCTGTCTCCCCTGGTGCGCCAGGAAATCTGGGCGGCGCTGGCGCTGCTGCGCCGCGAAGGCATGGCGATTCTGGTGATCGACAAGAACCTGGCGCCGCTGCTGCAACTGGCGGACCGCCACTATATCGTGGAAAAGGGCCGGATCGTCTGGGATGGCGATTCGGACGCCCTGAAGGCCGATGCGGGCGCCCGGCAGAAATACCTGGGGGCCTGA
PROTEIN sequence
Length: 238
MSENLLKVEDLVSGYGRSQVLYGMHLQIDAGQCVTLLGRNGMGKTTTVKNIMGMHPAWQGQVRFKGFGIQNLPSYRVAQRGIGLVPEGRQIFPNLSVEENLVATAADRHKKRNPWTLQRIYELFPRLRERAGNFGNQLSGGEQQMLAISRALMTNPELLILDEATEGLSPLVRQEIWAALALLRREGMAILVIDKNLAPLLQLADRHYIVEKGRIVWDGDSDALKADAGARQKYLGA*