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SCNpilot_solid_1_scaffold_750_6

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(4035..5204)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X203_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 388.0
  • Bit_score: 439
  • Evalue 4.20e-120
  • rbh
Extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 93.3
  • Coverage: 389.0
  • Bit_score: 730
  • Evalue 2.60e-208
  • rbh
Extracellular ligand-binding receptor {ECO:0000313|EMBL:CDM22712.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Cas similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 389.0
  • Bit_score: 730
  • Evalue 1.30e-207

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1170
ATGGCATTTCGCAAAACGATGCTGACGGCCGCCCTGACCCTGTCGCTGGGGCTGACCGCGGGGTCGGCGCTGGCTGAAGTCAAGATCGGTTTTCTGGCCACCTTGTCCGGCGCCGGCGCGGCTCTGGGCCAGGACATGGTGGACGGCTTCAACCTGGCGCTGGAAGAACGCGGCGGCAAGCTGGGCGGTCAGGACATCGTCTTTCTGAAGGAAGACGATCAGCTCAAGCCCGACGTGGGCGTGCAGGCGGTGCAGAAATTCCTGGAAAAGGACAAGGTCGATCTGGTGGCCGGCGTCACGTTTTCCAACGTCATGATGGCCATCGCCAAGCCGCTGGCCGATGCCGGCATGACCTTCGTCGGCTCCAACGCCGGCCCGGCGCCGCTGGCGGGCAATCAGTGCAATCCCGGCTTCTTTTTCGCCTCCTGGCAGAATGACGGGCAGGCCGAAGTCATGGGTCAGTTCGCCACCGACCAGAAATACAAAGACGTCTACATGATCACCCCCAACTACCAGTCGGGCCGCGATCAGGTGAAGGGCTTCACGCGCTTCTACAAGGGCCGCGTCTCGGGCGAGGTCTACACCCAGCTGGGCCAGCAGGATTATTCGGCGGAACTGCTGGCGCTGCAGGCCGCCAATCCGGCCGCCGTCTGGGTCTTCCTGCCCGGCGGCATGGGCGTGAACTTCGTCAAGCAGTACAAGCAGTTCGGCCTGATGGGCAAGATCCCGCTGCTGACGGTGTCCACGGTGGACGGCAGCACCCTGCCGGCCCTGGGCGACGCCGCCCTGGGCGCCTATGCGGGCACGTTCTGGGGGCCGGACTTCAAGAATCCCACCAGCGAGGCCTTCGTCGCCGCCTTCGAGAAAAAATACAAGCGCATCCCTTCGCAGTATGCCGCGCAGTCCTATGATTCGGCCCTGCTGATCGACAGCGCCCTGAAGAAGACCGGCGGCAAGGTCAGCGACAAGAAGGCGTTCCGCGATGCGCTGCGGGCCGCCGATTACGCCTCCCTGCGCGGGGCCTACAAGTTCAACGTCAACGGCTTCCCGATCGAGGACTTCTACGCCTTCGAGGTCGCCAAGGACGCGCAGGGCCGGGTGTCGCTGAAGACCATCGCCAAGCCCCTGACGAATCACGCCGACGCGTATTCCAAGAACTGCAAGTACTGA
PROTEIN sequence
Length: 390
MAFRKTMLTAALTLSLGLTAGSALAEVKIGFLATLSGAGAALGQDMVDGFNLALEERGGKLGGQDIVFLKEDDQLKPDVGVQAVQKFLEKDKVDLVAGVTFSNVMMAIAKPLADAGMTFVGSNAGPAPLAGNQCNPGFFFASWQNDGQAEVMGQFATDQKYKDVYMITPNYQSGRDQVKGFTRFYKGRVSGEVYTQLGQQDYSAELLALQAANPAAVWVFLPGGMGVNFVKQYKQFGLMGKIPLLTVSTVDGSTLPALGDAALGAYAGTFWGPDFKNPTSEAFVAAFEKKYKRIPSQYAAQSYDSALLIDSALKKTGGKVSDKKAFRDALRAADYASLRGAYKFNVNGFPIEDFYAFEVAKDAQGRVSLKTIAKPLTNHADAYSKNCKY*