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SCNpilot_solid_1_scaffold_750_15

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(12454..13371)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0UMR4_ALCFA similarity UNIREF
DB: UNIREF100
  • Identity: 78.8
  • Coverage: 302.0
  • Bit_score: 506
  • Evalue 1.70e-140
  • rbh
Transcriptional regulator, LysR family, in glycolate utilization operon similarity KEGG
DB: KEGG
  • Identity: 92.8
  • Coverage: 305.0
  • Bit_score: 587
  • Evalue 2.10e-165
  • rbh
Transcriptional regulator, LysR family, in glycolate utilization operon {ECO:0000313|EMBL:CDM22697.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenac similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 305.0
  • Bit_score: 587
  • Evalue 1.00e-164

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGGGCCGCTACACCGACATCAGCAGTTTTGTATTGATTGCCGACAAAGGCAGTTTCGCCGCGGCCGCGCTGGTGGAAGGCGTCACGCCGGTGGTCATGGGACGGCGCCTGACCGCTCTGGAGAAGCGTCTCGGGGTGCAGCTGATGCACCGGTCCACCCGGGGACTGGTGCTGACGGAACTGGGCGAGCGCTATCTGGAACAGTGTCAGCAGCTGATCCAGGATTTCGACAACGCGGATTCCAGCATCATGGCGCGGCGGCGCACCTTGAGCGGCCACCTGGTGGTGTCGGCGCCCGCGTCCTTCGGGCGCCTGCACGTGGCGCCGCACGCCCTGTCGTTTCGCCGCCGCTACCCCGATCTGGCGCTGTCCTTCAACTTCACCGACAGCGTGGTGGACCTGGTGCGCGAAGGCTACGACATGGCCATCCGCATCGGCGAAGTCACGGATCCGAACTACGTGGCGGTGCGCCTGTTTCCCAACCGGCGCGTGGTCTGCGGCACACCGGCCTATTTCGATTCGCACGGCGTGCCGCGCGTGCCCGAAGACCTGGTGCGGCACAACTGCCTGGCCTTCAATCTGCAGGGCGGCCAGCACCGCGGCTGGACCTTCGTGCGCGACGGCAAGCCCTTCGCCGTGCGGGTGCGGGGGGACCTGGCCTGCAACGATGGCGAACTGCTGTATCAATGGGTGCGGCAGGGGCTGGGCATCGGCTGGCGTTCCACCTGGGAAATCCAGCGCGAACTGAAGCGCGGCGAACTGGTGACCGTGCTGGACGAATTCGCGCTGCCCGCCTACGACATCCAGGCCGTCTACCCGCAGCAGCGGTATCTGCCGGCCAAGGTGCGCTATTTCATCGATGACCTTAGAAACCATTATCATGAGCCGGGTTACTGGGAAGGGCAGGGAAAATCTTGA
PROTEIN sequence
Length: 306
MGRYTDISSFVLIADKGSFAAAALVEGVTPVVMGRRLTALEKRLGVQLMHRSTRGLVLTELGERYLEQCQQLIQDFDNADSSIMARRRTLSGHLVVSAPASFGRLHVAPHALSFRRRYPDLALSFNFTDSVVDLVREGYDMAIRIGEVTDPNYVAVRLFPNRRVVCGTPAYFDSHGVPRVPEDLVRHNCLAFNLQGGQHRGWTFVRDGKPFAVRVRGDLACNDGELLYQWVRQGLGIGWRSTWEIQRELKRGELVTVLDEFALPAYDIQAVYPQQRYLPAKVRYFIDDLRNHYHEPGYWEGQGKS*