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SCNpilot_solid_1_scaffold_750_57

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 57274..58197

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BB85_RALP1 similarity UNIREF
DB: UNIREF100
  • Identity: 44.6
  • Coverage: 294.0
  • Bit_score: 229
  • Evalue 5.20e-57
DNA-binding transcriptional activator GcvA similarity KEGG
DB: KEGG
  • Identity: 44.6
  • Coverage: 294.0
  • Bit_score: 229
  • Evalue 1.50e-57
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACS61497.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralsto similarity UNIPROT
DB: UniProtKB
  • Identity: 44.6
  • Coverage: 294.0
  • Bit_score: 229
  • Evalue 7.30e-57

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Taxonomy

Ralstonia pickettii → Ralstonia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 924
ATGCCGGATCACCTGCCTTCGCTCAAGGCTCTACGCATCTTCGAAGCCGCCGGGCGCCACCACGGCTACAGCCGCGCCGCGGAAGAACTGTTCCTCACGCACAGCGCCGTCAGCCACCAGATCAAGGCGCTGGAGGCCGAGCTCGGAACAAAGCTGTTTCGGCGCGCGGGCCGCTCCATGTTGCTGACCGAAGACGGCCGGCGACTCTACCTTGCGGTGAACGAGGCCCTGTCGCTCATTGCGAAGGGTGTTGCGCAAGTACGCGCGGATGACCGGCCCCAGACCCTGAACGTCAGCGCGCCGCCTTCACTCGCGATCTGGCTGGTGCCGCGATTGGCAGACTTCCGACAACGCCACCCGCATCTGGAAATCAATCTCAGCGGCGCTATCGCGCTGGTCGATTTCAATCACGATGACGTGGATCTCGCCTTGCGTTTCGGCCACGGCGTCTGGCCGGGCTTGCGCGCGGATCGGCTTCCACTGGACGACCTCGTCTACCTGGCGGTCTGCAGCCCGGCATATCGTCGCGGACGCCTGCCCGGAACGGTCGGCGAACTACGCAAGTGCACCTTGATCCATCATCCATTCATGTCCTGGGTGGAATGGTTCAGGAGCGCGGGAAGGAACGTCGAGCCGTCGATGCCGGGGCCTCGTTTCAATGAGTACCCGCTCGCGATGCAAGCCGCGCTTTCCGGACAGGGGGTGATGCTCGCCAACCCGATCATGATCGGTGCTGAACTCGCAAGTGGCCGGCTGGTGCGCGTACTGCAGGATCAGCCCGCGTTTCGCCAGTCGTCCGCCTATTACATCGTCTTCCCGGAAAACCGCGCACTACCGTCCAAGGCGCGCGTATTCTGCGACTGGCTGCTGAAGCAGGCGCACCAATCGACCGCCGCAAAATCGAACATACGCGGCAAGACCTAG
PROTEIN sequence
Length: 308
MPDHLPSLKALRIFEAAGRHHGYSRAAEELFLTHSAVSHQIKALEAELGTKLFRRAGRSMLLTEDGRRLYLAVNEALSLIAKGVAQVRADDRPQTLNVSAPPSLAIWLVPRLADFRQRHPHLEINLSGAIALVDFNHDDVDLALRFGHGVWPGLRADRLPLDDLVYLAVCSPAYRRGRLPGTVGELRKCTLIHHPFMSWVEWFRSAGRNVEPSMPGPRFNEYPLAMQAALSGQGVMLANPIMIGAELASGRLVRVLQDQPAFRQSSAYYIVFPENRALPSKARVFCDWLLKQAHQSTAAKSNIRGKT*