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SCNpilot_solid_1_scaffold_19026_2

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(783..1832)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Herbaspirillum seropedicae RepID=UPI00031715FE similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 298.0
  • Bit_score: 405
  • Evalue 6.00e-110
Branched-chain amino acid transport system permease protein LivM similarity KEGG
DB: KEGG
  • Identity: 77.2
  • Coverage: 342.0
  • Bit_score: 547
  • Evalue 2.10e-153
Branched-chain amino acid transport system permease protein LivM {ECO:0000313|EMBL:CDM24178.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Ca similarity UNIPROT
DB: UniProtKB
  • Identity: 77.2
  • Coverage: 342.0
  • Bit_score: 547
  • Evalue 1.00e-152

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1050
ATGACCTCTGTTGTTTCGTCCGCGGCTGCGCCCGATCCGGGCACGGCCATCCACGACAGCCTGCGGCGCTACCGCCGCTCGGCCGACTGGAAGCCGCTGGAATATCTCTTCTGGTGCCTGCCTGTCGCGGCGTATTTCCTGTTTCCGGGCAACTACCTGCTGCTGAGCCAGATCGCGGTCACCAGCTTGTTCGCGCTCTCGCTCGACCTGATCTTCGGCTACGCGGGCATCATCTCGCTAGGGCACGCGGCGTTCTTCGGCATCGGCGCCTACACCGTCGGCCTGCTCGGCCTGCGCGGCATGGGCGATCCCCTGACCGGGCTGGTGCTGGCCGCGTTGTTCGCCGCGATCCTCGGGTTTCTCAGCAGCTTCCTGCTGTTGCGCGGCAGCGATCTGGCGCGGCTCATGGTGACGCTGGGCGTGGCGCTGATGCTCTACGAGCTGGCCAACAAGTTCAGCCGCATCACGGGCGGGGTCGATGGCATACCCGGCATCGAGATCAAGCCGGTGCTCGGGCTGTTCGAATTCGACCTGTACGGCCGCACTGGCTACATCTACGCGGTGGTGGTGCTGTTCGTACTGTTCTGGATCGCGCGGCGCATCGTGCATTCACCCTTCGGCCAGAGCCTGCGCGGTATCCAGATGAATGCGCAGCGCATGCCGGCGCTGGGCGTGCCGGTCAACCGGCGCCTGGTCGCGGTCTACACGCTGGGCGCGGCCTACGCGGGCGTGGCCGGAGCGATACTGGCGCAGACCAACCAGTTCGTTTCGCTCTCGGTGCTCGGTTTCGAGAATTCGGCCGATCTGCTGCTCATCCTCATCCTGGGCGGCACCGGGCGGCTGTACGGCGGGCTCATCGGCGCCATCGTGTTCATCGTCGCCAAGCATTTCCTGTCCGACCTGAACCCGCAGTACTGGCAGTTCTGGCTCGGCCTGGCGCTGGTGCTGCTGGTGATGTATGCGCGCGGCGGTATTCTGGGAACGGCGTCGAAATGGCTGGAAAAACGGCGCCAGCGCGCGCAGTCTCGCCCGGTGGGGGGTGCGGCATGA
PROTEIN sequence
Length: 350
MTSVVSSAAAPDPGTAIHDSLRRYRRSADWKPLEYLFWCLPVAAYFLFPGNYLLLSQIAVTSLFALSLDLIFGYAGIISLGHAAFFGIGAYTVGLLGLRGMGDPLTGLVLAALFAAILGFLSSFLLLRGSDLARLMVTLGVALMLYELANKFSRITGGVDGIPGIEIKPVLGLFEFDLYGRTGYIYAVVVLFVLFWIARRIVHSPFGQSLRGIQMNAQRMPALGVPVNRRLVAVYTLGAAYAGVAGAILAQTNQFVSLSVLGFENSADLLLILILGGTGRLYGGLIGAIVFIVAKHFLSDLNPQYWQFWLGLALVLLVMYARGGILGTASKWLEKRRQRAQSRPVGGAA*