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SCNpilot_solid_1_scaffold_1208_19

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 15027..15635

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T2F8_LEIAQ similarity UNIREF
DB: UNIREF100
  • Identity: 68.0
  • Coverage: 194.0
  • Bit_score: 252
  • Evalue 4.90e-64
TetR family transcriptional regulator {ECO:0000313|EMBL:KHK95868.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrov similarity UNIPROT
DB: UniProtKB
  • Identity: 75.3
  • Coverage: 194.0
  • Bit_score: 289
  • Evalue 5.10e-75
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 191.0
  • Bit_score: 188
  • Evalue 2.50e-45

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Taxonomy

Microbacterium mangrovi → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGTCCGCCGACCGCCGCCGCCGACTGACGCGCGACGAGCGCCGCGCGCAGCTGGTCGCCCTCGGCGTCAACTTCCTGGCAGAGCATCCGCTCGACGAGCTGACCATCGAGGAGCTGTCGGCGCAGGCGGGCGTCTCTCGCGCACTGGTGTTCCACTACTTCGGCACGCGGCAGGGTCTGCACCGCGAGGTCGTGCTGATGGCCCGCGACAGCTTGCTGCATGCCAGCACGCCCCGGCCTGAGCTGCCTGCCGAAGAGCGCCTGCGCGACACCCTCACCCGGATCGTCGTGTTCGTGCGCGAGCACCGCGGCACGTTCTATTCGCTCGTGCGCGGCGTTGCCAGCGGTGACGCGGCGATCCGCGCGGTCATCGACCAGTCGCGGGACGAGAACGCGCGTCGGCTGCTCGAGGTGTTCCTCGAGCAGCCGGTGGCCGATGACGACCTGCTGCGGGTGGCGCTGCGGTCGTGGGTCGGGTTCGCCGAGGAAGTGCTCGTGGAGCTGGCCGTGGAGGCCGAGCGCCCTGTCGCCGAGATCGTCGACTTCCTCGAGCGCACGGTGCAGGGAGTGGTGGCCGCCGTGGGCGGGCCCGGACCCGTTGGACGGTGA
PROTEIN sequence
Length: 203
MSADRRRRLTRDERRAQLVALGVNFLAEHPLDELTIEELSAQAGVSRALVFHYFGTRQGLHREVVLMARDSLLHASTPRPELPAEERLRDTLTRIVVFVREHRGTFYSLVRGVASGDAAIRAVIDQSRDENARRLLEVFLEQPVADDDLLRVALRSWVGFAEEVLVELAVEAERPVAEIVDFLERTVQGVVAAVGGPGPVGR*