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SCNpilot_solid_1_scaffold_2413_5

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(3766..4428)

Top 3 Functional Annotations

Value Algorithm Source
LuxR family transcriptional regulator n=1 Tax=Microbacterium yannicii RepID=UPI0002FBFA07 similarity UNIREF
DB: UNIREF100
  • Identity: 84.1
  • Coverage: 220.0
  • Bit_score: 358
  • Evalue 6.90e-96
  • rbh
Transcriptional regulatory protein LiaR {ECO:0000313|EMBL:KJL23167.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium folior similarity UNIPROT
DB: UniProtKB
  • Identity: 81.7
  • Coverage: 213.0
  • Bit_score: 342
  • Evalue 3.20e-91
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain similarity KEGG
DB: KEGG
  • Identity: 80.5
  • Coverage: 220.0
  • Bit_score: 337
  • Evalue 2.70e-90

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Taxonomy

Microbacterium foliorum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 663
ATGACGCGCGTGGCCCTCATCGACGACCATGAGTCGGTACGGCTGGGCTTGGAAGCGGCCTGCGCCCGGGCGACGGCGATGGATGTCGCCTTCTCGGGCAGCTCCGTCACCGAGTACCTCGACTGGCGAGCGCAGACCGGATCTGCACCCGCCGACGTCGTGGTGCTCGATCTCACCCTCGGCGACGGGACGACGGTGACCGAGAACGTGCACACGCTCGTGGTCGACGGCTCCAGCGTCATCATCCACAGCGTCGCCGATCGTCCGGCGGCGGTGCGCGAGGCGCTTGCTGCCGGCGCCGCGGGCATCGTCAGCAAGTCGTCGCCGATCGACGAGGTGATCGCCGCGGTCGGCGCGGTCGCCAGTGGCGAGCCGCTGAACAACGTCGAGTGGGCCAGCGCCGTCGACGGCGACCGTGCGTTCGCCGATGCGCAGTTGTCGGCGCGCGAGCGGGAGGTGCTGCGCCTGTATGCGACCGGTCTTCCGTTGAAGATCGTCGCCGACCGGCTCGGCATCGCCTATTCGACGGCGAAGGAGAACATCACGCGGGTGCGTGTGAAGTACGTCGAGGTCGGTCGGCCGGCCCCTACCAAGGTGGACCTGCTGCGTCGCGCCGTCGAGGACGGCATCCTGACACCTATTGAAGATGCCGGCGAGAACTGA
PROTEIN sequence
Length: 221
MTRVALIDDHESVRLGLEAACARATAMDVAFSGSSVTEYLDWRAQTGSAPADVVVLDLTLGDGTTVTENVHTLVVDGSSVIIHSVADRPAAVREALAAGAAGIVSKSSPIDEVIAAVGAVASGEPLNNVEWASAVDGDRAFADAQLSAREREVLRLYATGLPLKIVADRLGIAYSTAKENITRVRVKYVEVGRPAPTKVDLLRRAVEDGILTPIEDAGEN*