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SCNpilot_solid_1_scaffold_1175_3

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 4486..8361

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 92.3
  • Coverage: 999.99
  • Bit_score: 2365
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NF84_MICTS similarity UNIREF
DB: UNIREF100
  • Identity: 92.1
  • Coverage: 999.99
  • Bit_score: 2362
  • Evalue 0.0
  • rbh
rpoC; DNA-directed RNA polymerase, beta' subunit/160 kD subunit similarity KEGG
DB: KEGG
  • Identity: 92.0
  • Coverage: 999.99
  • Bit_score: 2360
  • Evalue 0.0

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Taxonomy

Microbacterium sp. SUBG005 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3876
GTGCTCGACGCAACAACTTTCGATGAGCTTCGCATCGGCCTGGCCACCGCCGACGACATCCGTCGCTGGTCCTATGGCGAGGTCAAGAAGCCCGAGACCATCAACTACCGCACCCTCAAGCCCGAGAAGGACGGTCTGTTCGGTGAGCAGATCTTCGGGCCCTCCCGCGACTGGGAGTGCGCGTGCGGCAAGTACAAGCGCGTTCGCTTCAAGGGCATCGTCTGCGAGCGATGCGGCGTGGAGGTCACCAAGTCGTCCGTCCGCCGCGAGCGGATGGGCCACATCGAGCTGGCCGCCCCCGTCACCCACATCTGGTACTTCAAGGGCGTGCCTTCGCGCCTGGGGTACCTGCTGGACATGGCGCCGAAGGACCTGGAGAAGGTCATCTACTTCGCCGCCTACATGGTCATCTCGGTCGACGAGGAGGGCCGCCACCGCGACCTGCCCACGCACGAGAACAACCTCCGGCTCGAGATGAAGACCGTTGCGGATCGTCGTGACTCCCGCGTGGCCGCGCGTCTTCAGAAGCTGGAGGAGGACCTCGCCGCTCTCGAGGCGGAGGGAGCCAAGGCCGACCAGAAGAAGAAGACGAAGGATGCCGCCGAGAAGGAGATGGCATCCATCCGCAAGAGCGCCGACGAGCAGATCGCCAAGCTCGAGCGCGTGTGGGAGGACTTCCGCACGCTTGAGGTGGGCGCCCTCAAGCCCGAGGACGACGTCTTCCATGAGCTGCAGGACCGCTTCGGCCAGTACTTCGAGGCGTACATGGGCGCCGAGTCCATCCAGCGGCGCCTGCAGGCGTTCGATCTGGCGGCGGAGGCCGAGAGCCTGCGCCTGCAGATCTCCGAGGGCAAGGGACAGCGCAAGATCCGTGCGATCAAGCGGCTGAAGGTCGTCAACTCGTTCCTGTCGACCGGGATGAGCCCGGCGTCGATGGTGCTCGACGTCGTCCCGGTGATCCCGCCGGAGCTGCGCCCGATGGTTCAGCTGGACGGTGGCCGCTTCGCGACGAGCGACCTGAACGATCTGTACCGGCGTGTGATCAACCGCAACAACCGCCTGCGTCGCCTCATCGACCTCGGCGCGCCCGAGATCATCGTGAACAACGAGAAGCGGATGCTGCAGGAGGCCGTTGACGCGCTGTTCGACAACGGTCGCCGCGGGCGCCCGGTCACCGGTACCGGCAACCGTGCGCTGAAGTCCCTGTCCGACATGCTCAAGGGCAAGCAGGGCCGGTTCCGTCAGAACCTGCTCGGCAAGCGCGTGGACTACTCGGGCCGTTCGGTCATCATCGTCGGTCCGACGCTGAAGCTGCACCAGTGCGGTCTGCCCAAGCAGATGGCGCTCGAACTGTTCAAGCCGTTCGTGATCAAGCGTCTTATCGACCTTGGCCACTCGCAGAACATCAAGGCCGCCAAGCGCGCCGTGGAGCGCACCCGGCCCGAGGTGTGGGACGTGCTCGAGGAGATCATCCGCGAGCGTCCGGTGCTCCTGAACCGTGCCCCCACGCTGCACCGCCTGGGCATCCAGGCGTTCGAGCCGCAGCTCGTCGAGGGCAAGGCCATCCAGCTGCACCCGCTGGTGTGCGCGGCGTTCAACGCCGACTTCGACGGCGACCAGATGGCCGTGCACCTGCCGTTGTCGGTCGAGGCGCAGGCCGAGGCCCGCATCCTGATGCTGGCGTCGAACAACATCCTCAAGCCGTCCGACGGACGCCCGGTGACCCTGCCCTCGCAGGACATGATCATCGGCTTGCACTACCTGACCACCCTCAAGGAGGGGGCAAGCGGTGAGGGCCGTGTGTTCGGCTCGGTGGGCGAGGCCATCCTCGCTCGCGACGAGGGCACGCTCGACCTGCAGGCGAAGGTGCGCATCCGCATCCCGGGGCTGACGTTCCTGGAGGGCGAGTCGCCCGAGGGCTACGAGACCCACGGTCTGGTGGACACCTCGCTCGGACAGGCGATCTTCAACGACGCGCTGCCCAAGGGCTATCCGTTCGTGCGCGAGCAGGCCGACAAGGGCAAGCTCAGCCAGATCGTGAACAAGCTGGCCGAGGAATACCCGAAGGTCACGGTCGCGGCGGCATTGGACGCGATCAAGGACGCCGGCTTCTACTGGGCCACCCGGTCGGGTGTGACCGTCGCGATGAGTGACATCCTCACCCCGCCGAACAAGGCCGACATCATCAGCGAGCACGAGAAGCGCGCGGCCAAGGTGCAGGGTCAGTACGAGAAGGGTCTGACGACCGACGCCGAGCGTCGTCAGGAGCTCATCAAGATCTGGACCGAGGCCACCGACGAGGTCCAGAAGGCGATGCGGGACAACTTCCCGGCCGACAACACCATCAACCGCATGGTCTCGTCGGGCGCCCGAGGGAACTGGCTGCAGATCCGCAACATCGCGGGTATGCGCGGTCTCGTGAACAACCCGAAGGGCGAGATCATCCCGCGTCCGATCATCTCCTCGTATCGCGAGGGGCTGAGCGTTGCGGAGTACTTCATCGCCACGCACGGCGCGCGCAAGGGTCTGGCCGACACCGCGCTGCGCACGGCCGACTCGGGGTACCTCACCCGCCGCCTGGTCGACGTCTCGCAGGACGTCATCATCCGTGAGGACGACTGCGGCACGAACAAGGGGCTCGAGCTGCCGATCGCCGCGGCCGGCGCGGACGGCAAGCTCGTGCGCGACGCGAACGTCGAGAACTCGGTGTTCGCCCGCACCCTGGCCACCGACGTCGTCTCGGAGTCCGGAGAAGTGCTCGCTGCGGCAGGCGACGACGTCGGCGACGTGCTGATCAACCGCCTCGTCGAGGCGGGCGTCACCAGCATCAAGGTGCGTTCGGTGCTGACCTGCGACTCCGCCGTCGGCGTGTGCGCACAGTGCTACGGCCGATCGCTTGCCACCGGCAAGCTCGTCGACATCGGCGAGGCGGTCGGCATCATCGCCGCCCAGTCGATCGGTGAGCCCGGCACGCAGCTGACCATGCGCACGTTCCACACCGGTGGTTCGGCCTCCGCCGATGACATCACCCAGGGTCTGCCGCGTGTCACTGAGCTGTTCGAGGCGCGCACCCCGAAGGGTGCGTCGCCGATCGCCGAGGCCGACGGCCGCGTCACGATCGACGAGACGGAGAAGACCCGCAAGGTCATCCTCACGCCCGACAATGGCGACGAGCCGCACGTGTACCCGGTGCTCAAGCGCGCGACCCTGCTCGTGGAGGACGGCCAGCACGTGTCGGTCGGCCAGCCGCTGCAGGTGGGCACGCTCGACCCGAAGGAGATCATGCGCGTGCAAGGCGCCCGCGAGGTGCAGAAGTACCTCGTCGGTGGCGTGCAGGGCGTGTACCGCTCGCAGGGCGTGCCGATCCACGACAAGCACATCGAGGTCATCGTGCGCCAGATGCTGCGCAAGGTCACCGTCGTCGATCACGGCGAGACCACGCTGCTGCCCGGCGAGCTGGTGGACTCGCGCCGGTTCATCGACATCAACCGGGCGTCGGTGGGCGAGGGCAAGCGCCCCGCCTCAGGCCGTCCCGAGCTGATGGGCATCACGAAGGCGTCGCTGGCGACCGAGTCGTGGCTGTCGGCCGCGTCGTTCCAGGAGACGACGCGCGTGCTGACGCAGGCCGCGATGGAGGGCAGGAGCGACCCGCTCGTGGGTCTGAAGGAGAACGTGATCATCGGAAAGCTGATCCCCGCCGGAACCGGACTGCCCAAGTACCGGAGCGTGGTGGTGGAGGCGACCGAAGAGGCCAAGAGCGAGCGGTACCCCAACCGCATCTTCGCCTCAGATGGCGCCTACAGCGATGCCGACCTGAGTTACGTCGACTTCGACAGTTTCTCGACGGACGACTACACGCCCGGGTCGTACAACTGA
PROTEIN sequence
Length: 1292
VLDATTFDELRIGLATADDIRRWSYGEVKKPETINYRTLKPEKDGLFGEQIFGPSRDWECACGKYKRVRFKGIVCERCGVEVTKSSVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDMAPKDLEKVIYFAAYMVISVDEEGRHRDLPTHENNLRLEMKTVADRRDSRVAARLQKLEEDLAALEAEGAKADQKKKTKDAAEKEMASIRKSADEQIAKLERVWEDFRTLEVGALKPEDDVFHELQDRFGQYFEAYMGAESIQRRLQAFDLAAEAESLRLQISEGKGQRKIRAIKRLKVVNSFLSTGMSPASMVLDVVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLRRLIDLGAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGTGNRALKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIIVGPTLKLHQCGLPKQMALELFKPFVIKRLIDLGHSQNIKAAKRAVERTRPEVWDVLEEIIRERPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQMAVHLPLSVEAQAEARILMLASNNILKPSDGRPVTLPSQDMIIGLHYLTTLKEGASGEGRVFGSVGEAILARDEGTLDLQAKVRIRIPGLTFLEGESPEGYETHGLVDTSLGQAIFNDALPKGYPFVREQADKGKLSQIVNKLAEEYPKVTVAAALDAIKDAGFYWATRSGVTVAMSDILTPPNKADIISEHEKRAAKVQGQYEKGLTTDAERRQELIKIWTEATDEVQKAMRDNFPADNTINRMVSSGARGNWLQIRNIAGMRGLVNNPKGEIIPRPIISSYREGLSVAEYFIATHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREDDCGTNKGLELPIAAAGADGKLVRDANVENSVFARTLATDVVSESGEVLAAAGDDVGDVLINRLVEAGVTSIKVRSVLTCDSAVGVCAQCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGSASADDITQGLPRVTELFEARTPKGASPIAEADGRVTIDETEKTRKVILTPDNGDEPHVYPVLKRATLLVEDGQHVSVGQPLQVGTLDPKEIMRVQGAREVQKYLVGGVQGVYRSQGVPIHDKHIEVIVRQMLRKVTVVDHGETTLLPGELVDSRRFIDINRASVGEGKRPASGRPELMGITKASLATESWLSAASFQETTRVLTQAAMEGRSDPLVGLKENVIIGKLIPAGTGLPKYRSVVVEATEEAKSERYPNRIFASDGAYSDADLSYVDFDSFSTDDYTPGSYN*