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SCNpilot_solid_1_scaffold_1976_18

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 18980..19474

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide export system ATP-binding protein LptB {ECO:0000313|EMBL:KJQ55044.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJQ55044.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Micr similarity UNIPROT
DB: UniProtKB
  • Identity: 82.9
  • Coverage: 152.0
  • Bit_score: 257
  • Evalue 1.30e-65
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002EAED2D similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 165.0
  • Bit_score: 251
  • Evalue 5.20e-64
branched-chain amino acid ABC transporter ATPase similarity KEGG
DB: KEGG
  • Identity: 72.1
  • Coverage: 136.0
  • Bit_score: 208
  • Evalue 1.40e-51

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Taxonomy

Microbacterium sp. SA39 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 495
TTGTCAAATGACCCGCAGGGGCAGCCCTCCGCGCAGCACGCTGCCCAGCCGCCCACCGAGACCGGCGGCATCCATCGCCCGAAGACGACGGGGCTGGCCGTCGGTGCGCCCGCGCCGGGCGTGCCGAAGAACGACCCGATCCTCGTGGTCGACAGCGTCACCCGCCGCTTCGGCGGCCTGAACGCGGTCGACGTCGACCACCTCGAGATCCCGCGCGGGGCCATCACCGCTCTCATCGGGCCCAACGGCGCCGGGAAGACGACGCTGTTCAACCTGCTGTGCGGGTTCGACAAGCCGAACTCCGGCCACTGGTCGTACGACGGGACGGATCTGTCCGGTGTGCCGTCGTTCAAGGTCGCCCGGATGGGGCAGGTGCGCACGTTCCAGCTCACCAAGGCGCTGTCGCTGCTGACCGTGCTGGAGAACATGAAGCTCGGCGCACGCGATCAGGTCGGCGAGCGGTTCTGGACGTCGCTGCTGCCGTTCGTCTGGCGC
PROTEIN sequence
Length: 165
LSNDPQGQPSAQHAAQPPTETGGIHRPKTTGLAVGAPAPGVPKNDPILVVDSVTRRFGGLNAVDVDHLEIPRGAITALIGPNGAGKTTLFNLLCGFDKPNSGHWSYDGTDLSGVPSFKVARMGQVRTFQLTKALSLLTVLENMKLGARDQVGERFWTSLLPFVWR