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SCNpilot_solid_1_scaffold_1526_18

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 19897..22509

Top 3 Functional Annotations

Value Algorithm Source
Superfamily II RNA helicase n=1 Tax=Microbacterium sp. TS-1 RepID=U2YMJ3_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 75.6
  • Coverage: 865.0
  • Bit_score: 1244
  • Evalue 0.0
  • rbh
Superfamily II RNA helicase {ECO:0000313|EMBL:GAD34284.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.6
  • Coverage: 865.0
  • Bit_score: 1244
  • Evalue 0.0
DEAD/DEAH box helicase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 58.4
  • Coverage: 870.0
  • Bit_score: 942
  • Evalue 7.30e-272

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Taxonomy

Microbacterium sp. TS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2613
GTGCGGCAGACTCGACAGGTGACCACCCTGCTCGACCGCGTCGCCGGTGCCGACCCCGACGCCGTGTACGACGGGTTCGTCGCCTGGGCGGGCGAGCGCGGGCTCACGCTGTACCCCGCGCAGGACGAGGCCGTCATCGAGCTCGTGTCGGGCGCCAACGTGATCCTGTCGACGCCGACCGGCACCGGCAAGTCGCTCGTCGCGATCGCCGCGCACGCGGCGGCACTGGCATCCGGTGGCCGCACGTACTACACGGCGCCCATCAAGGCGCTCGTGAGCGAGAAGTTCTTCGCCCTCGTCGAGGTCTTCGGAGCGGCGAACGTCGGCATGGTGACCGGGGACTCGTCCGTGAACCCGGATGCGCCCATCGTGTGCTGCACGGCCGAGATCCTCGCGAACATGGCGTTGCGGCAGGGTGCTGCCGCCCCCGTCGACCAAGTCGTGATGGACGAGTTCCACTTCTACGGCGATCCCGACCGCGGGTGGGCGTGGCAGGTGCCGCTGCTGCTTCTGCCGCGTGCGCAGTTCCTGCTGATGTCGGCCACGCTCGGCGACGTCACAGCGATCGCCGACGATCTGTCGCGGCGCACCGGGCGGCCGACGGCACAGGTCACGGGCGTCGAGCGGCCGGTGCCCCTGCACTTCTCCTACGAGATCCGGCCCGTGTACGAGGTGCTCGAGCTGCTGCTGGCGGACGGCGAGGTACCGGTCTACATCGTGCATTTCTCCCAGGCGGCGGCCGTCGAGCGTGCGCAGGCGCTGTCGAGCATGAAGATCGCCTCGCGCGAACAGCGTGACCGCATCGCCGAGGCGCTCGGTGATTTCCGGTTCTCCACCGGGTTCGGCAAGACGCTGTCGCGGCTCGTGCGCGCGGGCATCGGCATCCATCATGCGGGGATGCTGCCGCGGTACCGGCGACTCGTCGAGACGCTCGCGCAGCGGGGCCTGCTGCGGGTGATCTGCGGCACCGACACGCTCGGTGTCGGCATCAACGTGCCGATCCGCACGGTCGTCATCACCGAGCTGGCGAAGTTCGACGGCACCCGGATGCGGCAGCTGACCGCCCGCGAGTTCCATCAGGTCGCAGGCCGTGCCGGGCGTGCTGGGTTCGACCCGTACGGCAATGTCGTTGGGATGGCTCCGGAGTGGGAGATCGAGAACGCTCTCGCGCTGGCCAAGGCCGAGGGCAACCCCGCCAAGCGCAAGAAGATCGTGCGGAAGAAGGCCCCGACGGGGGCGGTCAACTGGGGCAGGGGATCATTCGAACGGCTGGTGGATCCCGCGCTCGAGGCGCTCGTGCCGCAGCTGCCGTTGACCGCGGCCATGCTCATCAACGTGATCGCCCGCGGCGGCGACGTGTTCGCGAACGTGCGGTCGCTGGTGTTCGACAACCATCAGACGCGCGCGCAGCAGTACGCGCTGGCGCGCCGCGCGCTGGCGATCTTCCGTACCCTGCGCGACGCCGGGATCGTCGAGGTCGTCCCGGTCGGCCCGGTCGGCCCGGTCGGCCCGGTCGGCCCGGTCGCCCCGCGAGCGGATTCCCCGGCCGCCCAGCGAGCGGAGCGAGTCGGAACGACACCGCCCGGCCGGCTCGGCGCGGCCCCGCGCTCGACGGCAGACCCCCGCCCCGGCATCCGCCTCACCGTCGATCTGCAGCCGAACTTCGCACTGAACCAGCCGCTGTCGCCGTTCGCCCTCGCCGCGATCGAACTGCTCGACCCGGATGACGCACGAGATGGCACGGCGGCTCCCGCCCCTGACGACGGCGCGCTGCCGGGAGCGCCCGGCCGGGTGGGCACCGGGCATTATGCGCTGGACGTGGTCAGCGTCATCGAGGCCACGCTCGACGACCCGCGGGCGATCCTGTCGCAGCAGGAGTTCCGCGCGCGCGGCGAGGCGGTCGCGGCCATGAAGCAGGAGGGACTGGACTACGACCAGCGCATGGCGGCGCTCGAGGACGTCACGTATCCCAAGCCGCTGGACGAGCTGCTGCACCAGGCGTACGAGGTGTTCGCGTCGAGCCAGCCCTGGGTGCGCGACTTCGAGCTGTCGCCCAAGTCGGTCGTGCGCGACATGTTCGAGCGCGCGATGACGTTCGCGGAGTTCGTCTCGTCGTATCAGCTCGCCCGCAGCGAGGGGCTGGTGCTGCGATACCTCTCCGACGCGTATCGCGCGATCCGCCAGAGCGTGCCGCTGGAGGCGCGCACATCGGAGCTGCTCGACGTCATCGAATGGCTCGGTGAGCTCGTGCGGCAGGTCGATTCGAGCCTCGTCGACGAGTGGGAGCAGCTCGTGCATCCGGCGGCCCCGGACGAGTCCGTCGGGCAGATCGTGCCCCCTGCCCCGCCGTCGGTGGTGGCCAATCACCGGGCGTTCACGGTGCTCGTGCGCAACGAGCTGTTCCGGCGCGTGCAGCTGGCCGCGCGCCAGCGCGACGACGATCTCATCGAGCTCGACCCGGACGCCGACTGGCCGGCGGCGCTGGACGCCTACTTCGCCGAGCATGACAGCATCGGCGTGGACGGACGCGCGCGCTCGCCGCGGCTGTGCGCGATCGCCGAGGAGCCTGCCGCGGGGCAGTGGCGTGTCGAGCAGACGATCGACGACCCCGCC
PROTEIN sequence
Length: 871
VRQTRQVTTLLDRVAGADPDAVYDGFVAWAGERGLTLYPAQDEAVIELVSGANVILSTPTGTGKSLVAIAAHAAALASGGRTYYTAPIKALVSEKFFALVEVFGAANVGMVTGDSSVNPDAPIVCCTAEILANMALRQGAAAPVDQVVMDEFHFYGDPDRGWAWQVPLLLLPRAQFLLMSATLGDVTAIADDLSRRTGRPTAQVTGVERPVPLHFSYEIRPVYEVLELLLADGEVPVYIVHFSQAAAVERAQALSSMKIASREQRDRIAEALGDFRFSTGFGKTLSRLVRAGIGIHHAGMLPRYRRLVETLAQRGLLRVICGTDTLGVGINVPIRTVVITELAKFDGTRMRQLTAREFHQVAGRAGRAGFDPYGNVVGMAPEWEIENALALAKAEGNPAKRKKIVRKKAPTGAVNWGRGSFERLVDPALEALVPQLPLTAAMLINVIARGGDVFANVRSLVFDNHQTRAQQYALARRALAIFRTLRDAGIVEVVPVGPVGPVGPVGPVAPRADSPAAQRAERVGTTPPGRLGAAPRSTADPRPGIRLTVDLQPNFALNQPLSPFALAAIELLDPDDARDGTAAPAPDDGALPGAPGRVGTGHYALDVVSVIEATLDDPRAILSQQEFRARGEAVAAMKQEGLDYDQRMAALEDVTYPKPLDELLHQAYEVFASSQPWVRDFELSPKSVVRDMFERAMTFAEFVSSYQLARSEGLVLRYLSDAYRAIRQSVPLEARTSELLDVIEWLGELVRQVDSSLVDEWEQLVHPAAPDESVGQIVPPAPPSVVANHRAFTVLVRNELFRRVQLAARQRDDDLIELDPDADWPAALDAYFAEHDSIGVDGRARSPRLCAIAEEPAAGQWRVEQTIDDPA