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SCNpilot_solid_1_scaffold_2073_21

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 24227..24886

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Mycobacterium sp. (strain JDM601) RepID=F5Z329_MYCSD similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 192.0
  • Bit_score: 218
  • Evalue 5.00e-54
TetR family transcriptional regulator {ECO:0000313|EMBL:KHK96070.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrov similarity UNIPROT
DB: UniProtKB
  • Identity: 64.9
  • Coverage: 202.0
  • Bit_score: 243
  • Evalue 2.70e-61
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 192.0
  • Bit_score: 218
  • Evalue 1.40e-54

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Taxonomy

Microbacterium mangrovi → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGACCGACCGTGCCCGCGAGACGTACCATCACGGCGACCTGCGCAACGCGCTGGTGCAGGCTGGACTCGATCTGACCCGACGCGGCGGGCCGGAGGCTCTCGTGCTGCGCGACCTCACGCGCACGGCCGGGGTGTCGCCGAGCGCGGCCTACCGGCACTTCCCCGACCGCAACGGTCTGGTCACGGCGGTCGCCGCGCGTATCCAGGACGCCATGGCTCAGCGCATGACGGCCGCGGCGAGGACTCCGACGCCTTCAGGGCGCGAGCGGCTGCGCGCGGTCGGACTCGGATACATCCGGTTCGCGATCCACGAGCCGGGCTGGTTCCAGACCGCGTTCACGAGCATCGATGCAGCGCCATCCGACACGCCGATCCCCGCACCTCTGTCCGCTCTCGTGGGCGCCTTGGACGCGCTCGTCGCGGAGGGGTGCCTCTCACCGTCCGACCGCGCCGGCGCCGAATGGCCATGCTGGTCGGCCGTGCACGGGTTCGCGCTGCTCGCCCTGCACGGACCGCTGCGGCGCCTGGGCGAGAGCGAACGGGATGCCGCTGCGCAACGGACCGTCGACGCGATCATCGACGGGGTGCTCGGTGAGGCAGAGCCGCGGCATCCGTCGCGACGATCAGCGCAGCGAACGGACGGCACTGCATCTCGCTGA
PROTEIN sequence
Length: 220
MTDRARETYHHGDLRNALVQAGLDLTRRGGPEALVLRDLTRTAGVSPSAAYRHFPDRNGLVTAVAARIQDAMAQRMTAAARTPTPSGRERLRAVGLGYIRFAIHEPGWFQTAFTSIDAAPSDTPIPAPLSALVGALDALVAEGCLSPSDRAGAEWPCWSAVHGFALLALHGPLRRLGESERDAAAQRTVDAIIDGVLGEAEPRHPSRRSAQRTDGTASR*