ggKbase home page

SCNpilot_solid_1_scaffold_2123_5

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(3783..4163)

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock protein n=2 Tax=Microbacteriaceae RepID=T5KDR2_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 73.0
  • Bit_score: 134
  • Evalue 5.50e-29
Cold-shock protein {ECO:0000313|EMBL:EQM73011.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.6
  • Coverage: 73.0
  • Bit_score: 134
  • Evalue 7.60e-29
csp; cold shock proteins similarity KEGG
DB: KEGG
  • Identity: 83.8
  • Coverage: 68.0
  • Bit_score: 126
  • Evalue 7.10e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium maritypicum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGCCCGGGCTGTGGGGCCATCCGCTCCCGCCTGGGCATCGATCGCCGCGGCATTCGTTCTGCAACATTTGTGTCACCATCCGGCCCCAGGCCACCACCGCGGGCTCCTGTTCGTTAGCGTTGATGCCATCCCGGTGCGCGGTGTGCCGGGAACCCCCGAAAGAACGGCAGTACATGAGCACGCAGGGCACCGTCAAGTGGTTCAACGCGGAGAAGGGCTTCGGCTTCATCGCCCCCGATGAGGGTGGCGCCGACGTCTTCGCGCACTACAGCGCGATCCAGTCCAACGGCTTCAAGACCCTCGAAGAGAACCAGCGCGTCGAGTTCGAGGTCGCCCAGGGCCCGAAGGGCCTGCAGGCCGAGAACATCCGCGCACTGTAA
PROTEIN sequence
Length: 127
MPGLWGHPLPPGHRSPRHSFCNICVTIRPQATTAGSCSLALMPSRCAVCREPPKERQYMSTQGTVKWFNAEKGFGFIAPDEGGADVFAHYSAIQSNGFKTLEENQRVEFEVAQGPKGLQAENIRAL*