ggKbase home page

SCNpilot_solid_1_scaffold_2310_4

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 2031..2738

Top 3 Functional Annotations

Value Algorithm Source
translation initiation factor IF-3 n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003645AB7 similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 211.0
  • Bit_score: 360
  • Evalue 1.50e-96
  • rbh
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.; similarity UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 215.0
  • Bit_score: 357
  • Evalue 1.40e-95
infC; translation initiation factor 3 (IF-3) similarity KEGG
DB: KEGG
  • Identity: 84.0
  • Coverage: 213.0
  • Bit_score: 351
  • Evalue 2.50e-94

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium sp. oral taxon 186 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 708
GTGCGGGTGGAATGCGCCTCGGCGCGTTCGCGTCGGAGCGAGCATCCAACGCACGAAGTTCCACCGCACGAAGAGGAGTTCCGCATCAGCGATCCCCGCACCAACGAGCGCATCCGCGTCCCCGAGGTCCGACTCGTCGGTCCCAACGGCGAGCAGGTCGGCGTCGTCTCCATCCAGGTCGCGCAGCGTCTGGCGCAGGAGGCCGATCTCGACCTCGTCGAGGTCGCGCCCAACTCGAAGCCTCCCGTGGTCAAGATCATGGACTACGGCAAGTACAAGTACGAAGCCGCCCAGAAGGCCAAGGAGGCGCGTCGCAATCAGGCCAACACGGTCCTCAAGGAGGTCCGGTTCCGGCTGAAGATCGAGGCGCACGACTACACGACCAAGCTCAAGCGCGCCGAGGGGTTCCTCAAGACCGGAGACAAGGTCAAGGCCATGATCCTGTTCCGCGGCCGTGAGCAGTCCCGCCCGGAGCTGGGGGTGCGCCTGCTCAAGCGCTTCGCCGACGACGTGGCCGAGTTCGGCACGGTCGAGTCGAACCCGCGCATCGACGGGCGCAACATGGTGATGGTGATCGCGCCGCACAAGAACAAGTCCGAGGTCAAGACCGAGCAGAACGCCCAGCGCGCCGCCAACAAGGAGGCGGCACGTCAGGCCAAGGCTGCCGCTCCCCGCACCTCGACCGCCTCCGCGGACACCGCCGAATAG
PROTEIN sequence
Length: 236
VRVECASARSRRSEHPTHEVPPHEEEFRISDPRTNERIRVPEVRLVGPNGEQVGVVSIQVAQRLAQEADLDLVEVAPNSKPPVVKIMDYGKYKYEAAQKAKEARRNQANTVLKEVRFRLKIEAHDYTTKLKRAEGFLKTGDKVKAMILFRGREQSRPELGVRLLKRFADDVAEFGTVESNPRIDGRNMVMVIAPHKNKSEVKTEQNAQRAANKEAARQAKAAAPRTSTASADTAE*