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SCNpilot_solid_1_scaffold_3299_2

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(1206..2225)

Top 3 Functional Annotations

Value Algorithm Source
LacI family transcriptional regulator n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B3528A similarity UNIREF
DB: UNIREF100
  • Identity: 58.1
  • Coverage: 327.0
  • Bit_score: 354
  • Evalue 9.00e-95
  • rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:KJC64017.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.8
  • Coverage: 340.0
  • Bit_score: 307
  • Evalue 1.80e-80
LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 45.0
  • Coverage: 340.0
  • Bit_score: 291
  • Evalue 2.60e-76

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Taxonomy

Agreia bicolorata → Agreia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1020
ATGCCCTCGAGCAACCCGGCCCCGCGCACTGCCGCGAGCATCCGCGACGTCGCGCGCCGCGCGGGTGTCTCACACATGACCGTGTCGCGGGTGCTCAACGACTCCGCGAACGTGCGGGAATCGACGCGCGCGCAGGTGCTCGCGGCCATCGCCGCGCTCAACTACCGCCCGAGCCCCGTCGCCCGCGCCCTGGCCAGCGGCGCGAGCCGGATGCTCGGCATCCTCGATGCCACCGGAGGCCTGCTGTACGGACCGATGAACACGGTCTGGGCCATCGAGTCCGCCGCCCGGCAGGTCGGCTACTCGGCGGTCGTCGCCGGTGTCGACCCGAGCGATCGCGACTCGGTCCGGCAGGCGGTGGAGCACCTGCTGAACCAGGAGGCCGCAGGCCTCATCGTCATCGGCCCCAGCGCCGGTGCGCGCGACGTGCTGGGCGAGCTCGCACCCGAAGTGCCGATCGTGACGATGCACGGCACCAGCGAGGAGCCGGTGATCATCGCGCAAGCCGAAGCGGCCCGCGCTGCCACCCGGCACCTGCTGCAGCTCGGGCACACCCGCATCGCTCACATCGCGGGACCGGCGGACTGGTTCGAGGCGACCTCACGCCGTCAGGGCTTCATCGACGAGCTGGCCGCCGCCGGCCTCGAACCGCTCGCGATCGAGTCCAGCGATTGGAGCCCGCAGTCCGGTTACGAGGCCGCGACCCGCCTGCTCGCCCGGGCGCCCGAAGCGACCGCGGTGTTCTGCGCGAACGACTCGATCGCGCTCGGGCTCCTGCATGCGGCCACGGATGCCGGACTCGAGCTTCCCGCCCAGCTCAGTGTGATCGGGGTCGACGACACCCCGGAGAGCGCGCACTTCCGCCCGCCGCTGACCACCCTGCGGCAGGACTTCGCCGAGGGCGGACGGCGCGCGGTGGTCTCGATCCTCGCCGCGCTCGGTCGCGACGTCACGGTGCCCCAGTCGTCCCTGGTCCCGCAGCTGATCGTGCGCGCATCGACGGCTGCGCCCCCACGCTGA
PROTEIN sequence
Length: 340
MPSSNPAPRTAASIRDVARRAGVSHMTVSRVLNDSANVRESTRAQVLAAIAALNYRPSPVARALASGASRMLGILDATGGLLYGPMNTVWAIESAARQVGYSAVVAGVDPSDRDSVRQAVEHLLNQEAAGLIVIGPSAGARDVLGELAPEVPIVTMHGTSEEPVIIAQAEAARAATRHLLQLGHTRIAHIAGPADWFEATSRRQGFIDELAAAGLEPLAIESSDWSPQSGYEAATRLLARAPEATAVFCANDSIALGLLHAATDAGLELPAQLSVIGVDDTPESAHFRPPLTTLRQDFAEGGRRAVVSILAALGRDVTVPQSSLVPQLIVRASTAAPPR*