ggKbase home page

SCNpilot_solid_1_scaffold_4009_8

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(6827..7846)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000377EB55 similarity UNIREF
DB: UNIREF100
  • Identity: 48.2
  • Coverage: 355.0
  • Bit_score: 308
  • Evalue 7.40e-81
Putative Pilus-associated protein pilM {ECO:0000313|EMBL:CDK01037.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C4 similarity UNIPROT
DB: UniProtKB
  • Identity: 56.0
  • Coverage: 341.0
  • Bit_score: 352
  • Evalue 4.80e-94
type IV pilus assembly protein PilM similarity KEGG
DB: KEGG
  • Identity: 35.2
  • Coverage: 321.0
  • Bit_score: 166
  • Evalue 9.80e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium sp. C448 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1020
ATGGCGAACACCATCGTCGGCGTCGAGATCACCGAAGAGAGCGTGCGGGCGGTCGAGCTGACCCGCGGCAACAATCCGCGCATCGTGGCAGCCGGCGAGATCCCGCTGCCTCCCGACGCGGCGAAGGACTCCGAGGCGCTCGATCAGGATGCCATCGCGCTCGCGTTGCGGCACCTGTGGAGCCGTGCCGGCATCCGCTCCCACAGCGTCACCCTCGGCGTGGGCAGCCGGCGCATCCTCGTGCGGGAGCACTCGACGCAGGCCATGAGCCGCCAGCTGCTCAAGCAGGCGCTGCCGTTCCAGGTGCAGGACCTTCTGCCGGTCCCGGTGAACCAGGCCGTGCTGGACTTCTATCCGATCACGCAGGCCGGCGGCCTGCTGCACGGTCTGCTGGTGGCTGCCGTCTCCGAGACCGTCGAAGACCTCATCGCCACGTTCGCCAAGGCGAAGCTGCACGTAGAGGCCGTCGACTTCGTGCCGTTCGGGCTCGCCCGCGCCGCACGTGTGATCGCCGCCCCTGGCGAGACGATGGCGATCGTGCACATCGGAGACCACACCAGCTACGTCGTGGTGGTCACCGACGGCATCCCGCAGTTCGTGCGGATCATCCCCGCTGAGATCGAGACCGCCGCCGTGCGCGCGCGCGCCCAGGCGGCAGCCGACGCCGACACGGTGCTGGAGACCGTTCCGCCCGAGCCCGTGCCGCTGCACGGACGTGCCGCGCTGCGCGCGGCCTCGGCATCCAGCGTCGCGATCGCCGACCTCGCCGGGCGCATCCGCAACACCCTGGCGTTCCATGCCAGCCGCCCCGGCGGCGAGCAGGTGAGCAGCGTGCGCATCTGCGGCGCCGGCGTCGCCGTGCCCGGGGTCGTCGACGCCTTGGTCTCGGCCATCGACGCGCAGCTGTCCCCGGTCACCGCCGAAGAGGTCGTGCGCTCCCGATCCATCGAGCTGGGCTCCGCCGACCTCGCGCTGAACCTCGTCGGCACCGCCGGCATCGCCCTCGACGGAGGCCGATGA
PROTEIN sequence
Length: 340
MANTIVGVEITEESVRAVELTRGNNPRIVAAGEIPLPPDAAKDSEALDQDAIALALRHLWSRAGIRSHSVTLGVGSRRILVREHSTQAMSRQLLKQALPFQVQDLLPVPVNQAVLDFYPITQAGGLLHGLLVAAVSETVEDLIATFAKAKLHVEAVDFVPFGLARAARVIAAPGETMAIVHIGDHTSYVVVVTDGIPQFVRIIPAEIETAAVRARAQAAADADTVLETVPPEPVPLHGRAALRAASASSVAIADLAGRIRNTLAFHASRPGGEQVSSVRICGAGVAVPGVVDALVSAIDAQLSPVTAEEVVRSRSIELGSADLALNLVGTAGIALDGGR*