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SCNpilot_solid_1_scaffold_5482_2

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 677..1915

Top 3 Functional Annotations

Value Algorithm Source
bifunctional D-altronate/D-mannonate dehydratase n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI0003765D62 similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 412.0
  • Bit_score: 767
  • Evalue 7.10e-219
  • rbh
Starvation sensing protein RspA {ECO:0000313|EMBL:EPR77474.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 412.0
  • Bit_score: 758
  • Evalue 3.50e-216
mandelate racemase/muconate lactonizing protein similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 411.0
  • Bit_score: 683
  • Evalue 3.80e-194
  • rbh

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Taxonomy

Leifsonia rubra → Leifsonia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1239
ATGAAGATCGAACGTGCTGAAGTCGTCGTCACGAGCCCGGACCGGAACTTCGTGACGTTGAAACTGACGACCGACGACGGACTGACCGGACTCGGCGACGCGACGCTGAACGGGCGTGAGCTGGCCGTCGTCGCCTACCTGTCCGAGCACATCGTGCCGCTGTTGCTGGGACGGGACGCCCATCGGATCGAGGACACCTGGCAGTTCCTCTACCGGTCCGCATACTGGCGCCGAGGGCCGGTGACGATGGCGGCCATCGCCGCGGTGGACATGGCGCTGTGGGACATCAAGGGCAAGGCCGCCGGGATGCCCGTGTACCAGCTGCTCGGGGGCGCATCGCGCACCGGCCTGCTCGCTTACGGGCATGCTTCGGGCAAGACCCTGCCGGAGCTGTTCGACAACATCCGCAGCTATCAGGAGCAGGGTTACCGTGCCATCCGCGTCCAGACCGGGGTTCCGGGATTGGCATCGATCTACGGGATCGCCTCGAACGCGACGTTCGAGGCCAACAAGGGCGTCCGCTACGACTATGAGCCCGCGCAGCGCGGGGCCTGGCCCAACGAAGAGGACTGGGACACGCGCGCGTACCTGCGGCACGTGCCGACCGTGTTCGAGGCGGTGCGCAGCGAGTTCGGCGCAGAGGTGCCGCTGCTGCACGACGGGCACCACCGAATGACGCCGATCCAGGCCGCGCAGCTGGGCAAATCGCTTGAACCATACGACCTGTTCTGGCTGGAGGACTGCACCCCCGCGGAGAACCAGGAGGCACTGCGTCTGGTGCGCCAGCACACGACCACACCCCTGGCGATCGGAGAGATCTTCAACACGGTGTGGGACTACCAGCAGATCATCCGCGAGCAGCTCATCGACTACGTGCGGTCGGCGGTCACGCACACCGGCGGGATCACGCACCTGAAGAAGGTGCTTGACTACGCGTCGCAGTACCAGATCAAGTCGGGCATGCACGGCCCGACCGACATCTCTCCGGTGGGCATGGCCGCAGCCCTGCACCTGGGGCTTTCGATCCACAACTTCGGCATCCAGGAGTACATGAAGCACGGCGAGAAGACGAACAGCGTGTTCGAGCAGTCGTACACGTGGGAGAACGGGATGCTGCACCCCGGTGACAAGCCGGGGCTGGGCGTCGACCTCGACGTCGACGAGGCCGGCAAGTACCCCTACGCGCAGGCCTACCTCCCCTACAACCGCCTCGCCGATGGCACCGTCCACGACTGGTGA
PROTEIN sequence
Length: 413
MKIERAEVVVTSPDRNFVTLKLTTDDGLTGLGDATLNGRELAVVAYLSEHIVPLLLGRDAHRIEDTWQFLYRSAYWRRGPVTMAAIAAVDMALWDIKGKAAGMPVYQLLGGASRTGLLAYGHASGKTLPELFDNIRSYQEQGYRAIRVQTGVPGLASIYGIASNATFEANKGVRYDYEPAQRGAWPNEEDWDTRAYLRHVPTVFEAVRSEFGAEVPLLHDGHHRMTPIQAAQLGKSLEPYDLFWLEDCTPAENQEALRLVRQHTTTPLAIGEIFNTVWDYQQIIREQLIDYVRSAVTHTGGITHLKKVLDYASQYQIKSGMHGPTDISPVGMAAALHLGLSIHNFGIQEYMKHGEKTNSVFEQSYTWENGMLHPGDKPGLGVDLDVDEAGKYPYAQAYLPYNRLADGTVHDW*