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SCNpilot_solid_1_scaffold_6059_3

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(864..1478)

Top 3 Functional Annotations

Value Algorithm Source
epimerase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B598B0 similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 193.0
  • Bit_score: 226
  • Evalue 2.20e-56
Epimerase {ECO:0000313|EMBL:AII03412.1}; TaxID=37919 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.1
  • Coverage: 193.0
  • Bit_score: 233
  • Evalue 2.00e-58
putative NAD-dependent epimerase/dehydratase similarity KEGG
DB: KEGG
  • Identity: 58.9
  • Coverage: 192.0
  • Bit_score: 225
  • Evalue 1.40e-56

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Taxonomy

Rhodococcus opacus → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 615
ATGCGCGTGTTCCTGGCCGGAGCATCCGGCGTCATCGGGCGTCGCCTGGTCCCTCTGCTGCGGATCGCCGGCCACGACGTGGCGGGCTTGACCCGCAGCGCACAGAATGCGGCCCTCATCGACGAGCTCGGAGCGAGCCCCATCGTCTGCGACGTCTACGACGCGGCAGCGCTGTCGGCCGCAGTCGCCCAGTACCAGCCCGACGTCGTGCTGCACGAGCTGACCGATCTGCCCGACGACGCCACGCAGATCGAGGCGTTCCGTGAACGGCACGCGCGCATTCGCATCGAGGGAACACACAATCTTCTGGCCGCCGCGCGCGCCGCGGCCGCCGCACGGGTGCTCGCGCAGAGCGTGGCATGGCCGATGCCGGCCGGGCCCGCCCGTGACGCGGTGGCCGAGCTGGAACGCTCGGTGCTGGCAGCACGCGGCGTGGTGCTGCGCTACGGCCAGTTCTATGGCGAGGGCACCTACTACCCTGAGACGATCCCGGGCGAGCCGCGCATCCAGGTCGACCGAGCCGCCGAGGCGACCGTGGCGGCTTTGGGTGAGGCGACCGGGGTGCTCGAGCTCACCGACGACGGAACACGTCGGATCCCGGCATCCGGCAGCTGA
PROTEIN sequence
Length: 205
MRVFLAGASGVIGRRLVPLLRIAGHDVAGLTRSAQNAALIDELGASPIVCDVYDAAALSAAVAQYQPDVVLHELTDLPDDATQIEAFRERHARIRIEGTHNLLAAARAAAAARVLAQSVAWPMPAGPARDAVAELERSVLAARGVVLRYGQFYGEGTYYPETIPGEPRIQVDRAAEATVAALGEATGVLELTDDGTRRIPASGS*