ggKbase home page

SCNpilot_solid_1_scaffold_7806_2

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 904..1536

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037D0FDF similarity UNIREF
DB: UNIREF100
  • Identity: 62.1
  • Coverage: 195.0
  • Bit_score: 225
  • Evalue 6.70e-56
ECF RNA polymerase sigma-E factor {ECO:0000313|EMBL:KJQ54898.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.7
  • Coverage: 189.0
  • Bit_score: 208
  • Evalue 1.20e-50
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 173.0
  • Bit_score: 171
  • Evalue 3.20e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium sp. SA39 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 633
ATGCACGCAGCGCTCCCGGTGGAGATGAAACGCACCGCCTCGAATCGTGCAATGGCTGATGTGAGCACCGACAGCGAGATCATCCGCCGATCCGTCGACGAGCCCGCTGCCTTCGCCGAGATCTTCGAGAGGCACGCGCGGGTCATCGTGGCCTATGCGGCCCGGCGCGTGGGCGTCCACGCCGCCGAGGACGTGCTGAGCGAGACGTTCCTGGTCGCCTTCCGGCGCCGTGGTGACTTCGACGCGTCGGCGGACTCCGCCAAGCCGTGGCTGTTCGGGATCGCCTCGCGGCACATCGCCCGCCATCGGGCACGCGAGGCGCAGCAGTGGCGTGCGATCGAGGCGGCGACGGGTCTGGATGCGGGAGCCGACGAGCGGGTCCCGGCGGCCGATGCGCGCGTGGACGCCGAGGCCGCGCTGCGCGAGCTCGCCCCGCGCATCGCGGCATTGCCGGAGCGCGACCGCGACATCCTGCTGCTGCACGCGTGGGGCGATCTGACCTTCGAGGAGATCGCGCTCGCCCAGGGCATTCCTGCCGCCACCGTGCGCACCCGCATGCATCGCCTGCGCAAGCGGCTGGCGGCGCACCCCAGCCGGATCCCGGCCCTGACCGATCGGAACGAGACGGAGTGA
PROTEIN sequence
Length: 211
MHAALPVEMKRTASNRAMADVSTDSEIIRRSVDEPAAFAEIFERHARVIVAYAARRVGVHAAEDVLSETFLVAFRRRGDFDASADSAKPWLFGIASRHIARHRAREAQQWRAIEAATGLDAGADERVPAADARVDAEAALRELAPRIAALPERDRDILLLHAWGDLTFEEIALAQGIPAATVRTRMHRLRKRLAAHPSRIPALTDRNETE*