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SCNpilot_solid_1_scaffold_7831_12

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 9532..10311

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.; similarity UNIPROT
DB: UniProtKB
  • Identity: 84.2
  • Coverage: 247.0
  • Bit_score: 406
  • Evalue 2.10e-110
RNA pseudouridine synthase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000372E91E similarity UNIREF
DB: UNIREF100
  • Identity: 83.4
  • Coverage: 259.0
  • Bit_score: 411
  • Evalue 4.80e-112
  • rbh
rsuA; 16S rRNA uridine-516 pseudouridylate synthase similarity KEGG
DB: KEGG
  • Identity: 79.1
  • Coverage: 244.0
  • Bit_score: 376
  • Evalue 8.10e-102

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Taxonomy

Microbacterium oleivorans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 780
ATGACGGCCGCGGAGGGAGTGCGCCTGCAGAAGGCGCTCGCCGGCGCGGGCGTCGCGTCGCGCCGGGTGTGCGAGCAGCTGATCGTGGAGGGCCGGGTGCGCGTGAACGGTGTCGTGGTCCGTGAGCTCGGCTCGCGCATCGATCCGGAGCGCGACCTCGTCGACGTCGACGGCACGGCGGTGCAGTTCGACCAGTCGATGCGGTACGTCCTGCTGAACAAGCCCACCGGCGTGGTCAGCTCGATGCACGACGACCGCGGCCGGCCCGACCTGCGCCGCTTCACCGGCGGGTGGCCGGAGCGCCTGTACAACGTCGGGCGGCTGGATGCCGAGACCAGCGGCCTGCTCGTGCTCACGAACGACGGCGAGCTTGCGCACGTGCTGGCCCATCCCTCGTTCGGAGTCACCAAGGTGTATGTCGCGAAGGTGCGCGGCGCCGTGACACCGCAGACCATCGCGCGCCTCACGCGTGGCGTGCAGCTGGAGGACGGGCCGATCGCCGCCGACAAGGCGCGGCTGCTGGACCGCTCGGGCTCCACGAGCCTCGTCGAGCTCACCCTGCACTCGGGCCGCAACCGCATCGTGCGCAGGATGATGGCGGAGGTGGGGCATCCCGTCGACGAGCTCGTGCGCCGCGGGTTCGGCCCGCTGCACCTGGGAACACTCCCGGTGGGCGCCACCCGCGAATTGACTAAAGTGGAACGCGGCGCGCTGCTGACCCTCGCGCGCCGCGAGCCGGGGGAGCCGACACCGCCGGGAGCCGACCGGGAGACCCCATGA
PROTEIN sequence
Length: 260
MTAAEGVRLQKALAGAGVASRRVCEQLIVEGRVRVNGVVVRELGSRIDPERDLVDVDGTAVQFDQSMRYVLLNKPTGVVSSMHDDRGRPDLRRFTGGWPERLYNVGRLDAETSGLLVLTNDGELAHVLAHPSFGVTKVYVAKVRGAVTPQTIARLTRGVQLEDGPIAADKARLLDRSGSTSLVELTLHSGRNRIVRRMMAEVGHPVDELVRRGFGPLHLGTLPVGATRELTKVERGALLTLARREPGEPTPPGADRETP*