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SCNpilot_solid_1_scaffold_7906_2

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 539..847

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L21 n=2 Tax=Microbacterium RepID=H8E844_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 90.2
  • Coverage: 102.0
  • Bit_score: 185
  • Evalue 2.90e-44
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 102.0
  • Bit_score: 184
  • Evalue 8.90e-44
rplU; ribosomal protein L21 similarity KEGG
DB: KEGG
  • Identity: 90.2
  • Coverage: 102.0
  • Bit_score: 183
  • Evalue 3.10e-44

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Taxonomy

Microbacterium mangrovi → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 309
GTGGTTTACGCAGTTGTGCGCGCCGGTGGCCGGCAGGAGAAGGTCGAGGTCGGCACGGTCGTCGTCCTCGACCGCCAGCAGGCGAAGGTCGGCGAGACCATCCAGCTTCCCGCAGTGCTCCTGGTCGACGGTGACGCCGTAACCAGCGACGCCGCCAAGCTCGCCAAGGTCGCGGTGACCGCCGAGGTGCTCGGCGAGGAGCGCGGCCCGAAGATCGTGATCCAGAAGTTCAAGAACAAGACCGGCTACAAGAAGCGCCAGGGGCACCGCCAGGACCTCACGCGCGTCAAGGTCACCGGCATCAAGTAG
PROTEIN sequence
Length: 103
VVYAVVRAGGRQEKVEVGTVVVLDRQQAKVGETIQLPAVLLVDGDAVTSDAAKLAKVAVTAEVLGEERGPKIVIQKFKNKTGYKKRQGHRQDLTRVKVTGIK*