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SCNpilot_solid_1_scaffold_4306_6

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 3580..4302

Top 3 Functional Annotations

Value Algorithm Source
LuxR family transcriptional regulator n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037D9199 similarity UNIREF
DB: UNIREF100
  • Identity: 71.7
  • Coverage: 240.0
  • Bit_score: 324
  • Evalue 9.20e-86
  • rbh
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain similarity KEGG
DB: KEGG
  • Identity: 74.3
  • Coverage: 237.0
  • Bit_score: 322
  • Evalue 1.30e-85
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:BAJ74759.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 74.3
  • Coverage: 237.0
  • Bit_score: 322
  • Evalue 6.40e-85

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Taxonomy

Microbacterium testaceum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 723
GTGCCTGAGCCGCTGCGCGTGCTGCTCGTGGACGACCACGCCATGATGCGTGCGGGATTCCGCTTGATCCTGCACGCCGAAGACGACATCCGGGTCGTCGGTGAAGCCTCGACCGGTGCCGAGGCGCTGGCCGCCGCCCGGGATCTGCACCCCGACGTCGTCTGCATGGACGTGCAGATGCCCGATATGGACGGCCTGGAGGCCACCCGCCGCCTGGTCGCCGACCCCGAGGTGGCCTCGGCGGTGCTGATCGTCACGACGTTCGATCGCGACGACTACCTGTTCGCGGCACTGGCCGCCGGCGCTGCGGGCTTCCTGCTGAAGAACGCCGGGCCGGAGGAGCTCGTGCGCGCCGTGCGGGTGACCGCCGCCGGCGACGCCCTGCTGGCACCCGAGGTGACGAGGCGGGTCATCGCCCGCTTCGCGCAGGGTGCGGCAGCATCCGGGCCGCCCGCCCTGCAGGGCGGCGCACGGCCGTCGCCTCCGGTCGTTGAGCGAGCGAGCGCAGCGCCCGACCCGGAGCGCCCGCTCGTCGAGCTCACCGACCGCGAGGCCGAGGTGCTGCGGCTGGTGGCGGAGGCGTTGAGCAACGCCGAGATCGCCCAGCGCCTGTTCATCGGCGAGGCGACGGTGAAGACGCACGTCTCGAACGTGCTCGCCAAGCTCGGCGCCCGCGACCGCGTGCAGGCCGTCGTGCTGGCGTATCGCCACGGCCTTGCCTGA
PROTEIN sequence
Length: 241
VPEPLRVLLVDDHAMMRAGFRLILHAEDDIRVVGEASTGAEALAAARDLHPDVVCMDVQMPDMDGLEATRRLVADPEVASAVLIVTTFDRDDYLFAALAAGAAGFLLKNAGPEELVRAVRVTAAGDALLAPEVTRRVIARFAQGAAASGPPALQGGARPSPPVVERASAAPDPERPLVELTDREAEVLRLVAEALSNAEIAQRLFIGEATVKTHVSNVLAKLGARDRVQAVVLAYRHGLA*