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SCNpilot_solid_1_scaffold_6715_5

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 4940..5620

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1348253 speci similarity UNIPROT
DB: UniProtKB
  • Identity: 37.0
  • Coverage: 243.0
  • Bit_score: 106
  • Evalue 5.20e-20
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KLI3_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 37.5
  • Coverage: 240.0
  • Bit_score: 94
  • Evalue 1.50e-16
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 36.1
  • Coverage: 230.0
  • Bit_score: 88
  • Evalue 3.00e-15

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Taxonomy

Microbacterium mangrovi → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 681
GTGGAGTCCATCTCCGAGGTCCACACCGACGCGCCCGCCGCGGATCGCAACGACGCGGCCGACGTCGGCCGTACCGCCGACGTCGACGCGCCTGCCACCGCTGACGCGCCCGCCACCGCACCCCGCAAGCGCGCACCACGCCGTGCGAAGACCGCCGTCGTCACGCCCGAATCCGCACCGGAGCCCGCGCCCGAGGCTCACGCCCCGGCGCCCGCCGAGGCCCCGGCGGCATCCGCCGGGACGGAGGCGGCTGCCGAGCCCGCCGCCAAGAAGCCGGCGACCAAGCGTCGCACCACGGCGAAGAAGAAGACCGCCGACGACGCGTCTGCGCAGACCGACGCTGCGGCGCCCGAGGCCGGCGAGGCCGCGTCGTCGTCGAGCGCTGCCGTCGACGAGCCTGCGCAGGCCGCCGAGGGTCAGGCTGCCGAGGGCCAGGCCGCCAAGCAACAGGCGTCCCGGGCTCGAGGCACGCGCGGCGCCGCCAAGGACGACGCCGCCTCGGCCGGCACCGACGACGCCGAGTCCGGCGATGCGCCGTCGACCGGTGAGACGTCGGCGCCGGCGAAGGGCGACGAGAACGGCCAGGGCGAGGGCGGCGAGCAGACGAGCCGTCGCAGCCGCAATCGCAACCGCAACCGCAACCGAAACGGCAACGGCAATGGCAGCGGCGGCGGCGCGAAC
PROTEIN sequence
Length: 227
VESISEVHTDAPAADRNDAADVGRTADVDAPATADAPATAPRKRAPRRAKTAVVTPESAPEPAPEAHAPAPAEAPAASAGTEAAAEPAAKKPATKRRTTAKKKTADDASAQTDAAAPEAGEAASSSSAAVDEPAQAAEGQAAEGQAAKQQASRARGTRGAAKDDAASAGTDDAESGDAPSTGETSAPAKGDENGQGEGGEQTSRRSRNRNRNRNRNGNGNGSGGGAN