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SCNpilot_solid_1_scaffold_6515_3

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(1348..2031)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003171728 similarity UNIREF
DB: UNIREF100
  • Identity: 71.9
  • Coverage: 221.0
  • Bit_score: 309
  • Evalue 2.90e-81
  • rbh
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 74.0
  • Coverage: 204.0
  • Bit_score: 307
  • Evalue 1.50e-80
rimM; RimM protein similarity KEGG
DB: KEGG
  • Identity: 71.8
  • Coverage: 213.0
  • Bit_score: 304
  • Evalue 2.60e-80

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Taxonomy

Microbacterium sp. TS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 684
ATGGCGTCGGATCAGGCCAACAAGACCGGCAAGCACCACACGCCGCAGCCCGTGGGAACACAGCTCCGCGTGGCGCGGCTGCTGAAGGCGCACGGCCTGAAGGGCGCCATCAAGCTCGAGCTGTACACCGACGACCCGGACGGGCGATTCGTCCCGGGTGCCACGTTCACCCTGCAGGTGCCCGAGTCGTCGCCCTGGCACGGCAGATCCGTCACCGTGCGCGAGTTCAAATGGATGAACTCGCACCCCGTCGTCTTCCTCGAGGGGGTGGAGGATCGCACAGCCGCCGAGGAGCTCGTCAAGGCGATCCTGTGGGTGGAGTCCGACCCCGCGGAGCAGATCGAAGAGGACGCCTGGTACGACCACCAGCTCGTCGGGCTCGACGTCGTGCGTGACGGTGCGGTCGTCGGGCGTGTCAGCCGGGTGGACCATCTGCCCGCTCAGGACCTGCTCGTGGTCGTACAGGACGGGCAGGAGGTGCTGGTGCCGTTCGTGAAGGCGATCGTGCCGGAAGTGGACGTCGCCGCGCGACGCGTCGTCGTGACCCCGCCCGCGGGCCTGTTCGAAGATCTGCCGGCCGATGCGGACGACGAGCCTGCGGATGCGGGCGGCGCCGAGCCGACCGCAGGTGACGAGGCCGGTGACGGGGATACCGCATCCGGAACCGGCACCGACATCGGCTGA
PROTEIN sequence
Length: 228
MASDQANKTGKHHTPQPVGTQLRVARLLKAHGLKGAIKLELYTDDPDGRFVPGATFTLQVPESSPWHGRSVTVREFKWMNSHPVVFLEGVEDRTAAEELVKAILWVESDPAEQIEEDAWYDHQLVGLDVVRDGAVVGRVSRVDHLPAQDLLVVVQDGQEVLVPFVKAIVPEVDVAARRVVVTPPAGLFEDLPADADDEPADAGGAEPTAGDEAGDGDTASGTGTDIG*