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SCNpilot_solid_1_scaffold_6461_2

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(617..1462)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 279.0
  • Bit_score: 432
  • Evalue 5.20e-118
tRNA pseudouridine synthase A n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NEJ4_MICTS similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 281.0
  • Bit_score: 425
  • Evalue 3.40e-116
  • rbh
truA; pseudouridylate synthase similarity KEGG
DB: KEGG
  • Identity: 75.8
  • Coverage: 281.0
  • Bit_score: 424
  • Evalue 2.80e-116

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Taxonomy

Microbacterium oxydans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 846
GTGCGCATCCGGCTTGACATCGCCTACGACGGTACCCACTTCCGCGGGTGGGCGCGCCAGCCCGGGCTGCGCACTGTTCAGGGGACGCTCGAACAGGCCCTGGCACGCATCCTCGGGGGCCAGGTGCGGCTCGTGGTTGCCGGGCGCACCGACGCCGGGGTGCATGCTCGTGGCCAGGTCGCGCACTTAGACCTCGACGATGAGCAGCGGGAACGGCTGTTCACGCGCACGCGGCGGGACGGCGCGGGAGATCCGGTCGAGCGTCTTGCCTATCGCGTGCGCGGGGCGCTGGGCGCCTACTCCGACGTCACCGTGCGTCGCACGCAGATCGCGCCCGACGGGTTCGACGCCCGGTTCTCGGCGGTGTGGCGGCGCTATGAGTACCGGGTCGCGGATCAGATCAGCGGCTACGACCCGCTGGAGCGGGCCCGCACGACCACCGTGCGCGGGGCGCTCGACGTGGATGCGATGGATGCCGCGGCGCGGTCGCTCATCGGATTGCACGACTTCGCGGCGTACTGCAAGCCGCGCGACGAGGCGACCACGATCCGCACCCTGCTGGAGTTCGACTGGCGCCGGGAGGCCGACGGCGTGCTGGTGGCCAACATACGCGCCGACGCGTTCTGCCACTCCATGGTGCGGGCGCTGGTGGGCGCGTGCGTGGCGGTCGGCGACGGCCGGCTGTCGGTCGGGGATGCGGCGACGCTGCGCGACGCGGGGGAACGGACCAGCGCCTTCGCTGTGCTTGCCGCACGTGGTCTCACCCTGGCCGAGGTCGGCTATCCCGCCGACGATCTGCTCGCGGCGCGGGCCGAGCAGACCCGCGCGCGCCGCGACGCGGAGTAG
PROTEIN sequence
Length: 282
VRIRLDIAYDGTHFRGWARQPGLRTVQGTLEQALARILGGQVRLVVAGRTDAGVHARGQVAHLDLDDEQRERLFTRTRRDGAGDPVERLAYRVRGALGAYSDVTVRRTQIAPDGFDARFSAVWRRYEYRVADQISGYDPLERARTTTVRGALDVDAMDAAARSLIGLHDFAAYCKPRDEATTIRTLLEFDWRREADGVLVANIRADAFCHSMVRALVGACVAVGDGRLSVGDAATLRDAGERTSAFAVLAARGLTLAEVGYPADDLLAARAEQTRARRDAE*