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SCNpilot_solid_1_scaffold_6461_6

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(5001..5777)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 254.0
  • Bit_score: 473
  • Evalue 2.40e-130
DNA-directed RNA polymerase subunit alpha n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037CB15C similarity UNIREF
DB: UNIREF100
  • Identity: 95.7
  • Coverage: 254.0
  • Bit_score: 477
  • Evalue 1.20e-131
rpoA; DNA-directed RNA polymerase, alpha subunit/40 kD subunit similarity KEGG
DB: KEGG
  • Identity: 94.5
  • Coverage: 254.0
  • Bit_score: 468
  • Evalue 9.20e-130

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Taxonomy

Microbacterium mangrovi → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 777
ACCGAGATCATACTGAACATCAAGCAGCTCGTGGTCTCGTCCGAGCGCGATGAGCCCATCACCGCCTACCTGCGCAAGACCGGCGCCGGCGAGGTCACCGCCGCCGACATCTCGGCCCCTGCCGGTGTCGAGGTGCACAACCCCGACCTGGTCATCGCGACGCTCAACGACACCGCGCGTTTCGAGCTCGAGCTGACGATCGAGCGTGGCCGCGGCTACGTCTCGGCGACGCAGAACCGCAACGAGTACGCCGAGGCCGGTCAGATCCCGATCGACTCGATCTACTCGCCGGTGCTCAAGGTCAGCTACCGCGTCGACGCGACCCGTGCCGGCGAGCGCACCGACTTCGACAAGCTGGTGTTGGATGTCGAGACGAAGCCGGCGATCTCGCCGCGCGACTCCGTCGCCTCGGCCGGACGCACGCTCACCGAGCTGTTCGGCCTCGCCCGCGAGCTGAATGTCGATGCCGAGGGCATCGAGATCGGTGCGGCGCCGGTGGAGACCGTCGCCTCGACCGAGTTGTCGATGCCGATCGAAGACCTCGATCTGTCGGTGCGGTCGTACAACTGCCTCAAGCGCGAGGGCATCAACACGGTCTCGGAGCTGGTCGCCCTCTCCGAGACGCAGCTGATGAACATCCGCAACTTCGGTCAGAAGTCGGTCGACGAGGTGCGCGACAAGCTCGTCTCGCTCGGCCTGTCGCTGAAGGACTCCGTGCCCGGCTTCGACGGCGCGCACTTCTACGGCGGCTACGACGACGAGCCCGAGAACGACTGA
PROTEIN sequence
Length: 259
TEIILNIKQLVVSSERDEPITAYLRKTGAGEVTAADISAPAGVEVHNPDLVIATLNDTARFELELTIERGRGYVSATQNRNEYAEAGQIPIDSIYSPVLKVSYRVDATRAGERTDFDKLVLDVETKPAISPRDSVASAGRTLTELFGLARELNVDAEGIEIGAAPVETVASTELSMPIEDLDLSVRSYNCLKREGINTVSELVALSETQLMNIRNFGQKSVDEVRDKLVSLGLSLKDSVPGFDGAHFYGGYDDEPEND*