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SCNpilot_solid_1_scaffold_7447_7

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(4395..5204)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter n=1 Tax=Microbacterium sp. 292MF RepID=UPI000380989C similarity UNIREF
DB: UNIREF100
  • Identity: 83.5
  • Coverage: 273.0
  • Bit_score: 445
  • Evalue 4.00e-122
  • rbh
Antimicrobial peptide ABC transporter permease protein {ECO:0000313|EMBL:GAD34918.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Micro similarity UNIPROT
DB: UniProtKB
  • Identity: 83.4
  • Coverage: 253.0
  • Bit_score: 420
  • Evalue 1.50e-114
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 76.7
  • Coverage: 257.0
  • Bit_score: 388
  • Evalue 1.60e-105

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Taxonomy

Microbacterium sp. TS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 810
GACATGGAGATCACATCGACCGACCTGGGCCTGGCCGCCCGGGTTCAGCAGCTGACGAAGACCTACGGCAGGGGCGAGAGCCTCGTGCATGCTCTCGAGGGCGTGACCGTCGGCATCTGTCGCGGCGAGTTCACCGCGATCATGGGTCCTTCGGGTTCCGGCAAGTCCACGCTCATGCACATCTTCGCGGGCCTGGACGCCCCCACCGGCGGCCGGGTGTGGATCGGCGACACCGAGATCACCGGGCTCAGCGACCTCGAACTGACCGTGCTGCGTCGCAGGCGGGTCGGCTTCGTCTTCCAATCGTTCAACCTTGTACCCACGCTTGATGTGATGGGCAACGTCCTGCTGCCGTTCGACCTCGACGGCCACCGCCCCACTGCGCTGGAGCGTGCCCGTATCGACGGGCTCATCGAGTCGCTCGGCCTCGCCGACCGGCTCGCCCATCGGCCGCACGAGCTGTCCGGCGGTCAGCAGCAGCGCGTGGCGATCGCCCGCGCGCTGGCGACCGCCCCCGACCTGGTGTTCGCCGACGAGCCGACCGGCAACCTCGACTCCCGCACCAGCCGGGAGGTGCTGGCGCTGCTGCGCGCGGCCAGCGCCGAGCACGGCCAGTCCATCGCGATGGTCACGCACGACCCGATCGCCGCGTCACACGCCGACCGAGTGCTCTTCCTCGGCGACGGCCGGATCGTCGCCGACAAGCCGCGGCAGAGCCCCGAGGAGATCTCGGCCTACATGCTGGCGGCGGAGCTCGGCACGGTGACGGATGCCGCGGGCGTCCGCGATGCGGCGGAGGCGACGGCGTGA
PROTEIN sequence
Length: 270
DMEITSTDLGLAARVQQLTKTYGRGESLVHALEGVTVGICRGEFTAIMGPSGSGKSTLMHIFAGLDAPTGGRVWIGDTEITGLSDLELTVLRRRRVGFVFQSFNLVPTLDVMGNVLLPFDLDGHRPTALERARIDGLIESLGLADRLAHRPHELSGGQQQRVAIARALATAPDLVFADEPTGNLDSRTSREVLALLRAASAEHGQSIAMVTHDPIAASHADRVLFLGDGRIVADKPRQSPEEISAYMLAAELGTVTDAAGVRDAAEATA*