ggKbase home page

SCNpilot_solid_1_scaffold_4978_3

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(1578..2429)

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate-binding protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2I4_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 74.0
  • Coverage: 277.0
  • Bit_score: 408
  • Evalue 7.50e-111
  • rbh
LysR substrate-binding protein {ECO:0000313|EMBL:EIC08714.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans similarity UNIPROT
DB: UniProtKB
  • Identity: 74.0
  • Coverage: 277.0
  • Bit_score: 408
  • Evalue 1.10e-110
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 59.7
  • Coverage: 278.0
  • Bit_score: 331
  • Evalue 1.90e-88
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium laevaniformans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 852
ATGACGTTCCTCGCGGTGGCGCGGCTCGGCCGCTACACGGCCGCCGCCGAGGTGCTCGGGATGAACCACTCCACGGTGTCGCGGCGCATCGCCGCGCTCGAGCAGGCCATGGGTGGCCGCATCCTGGTGCGCACCGCGGGTGGATGGGAGATCACCGAGCTCGGCCGCCGGGCGATGGCGGCGGCCGAGGGCATCGAGGCATCGCTGCGCGTGCTCGGCGAGGACACCGGCGGCGATCCCGTGCAGGGGATGGTGCGCATCGCCGCGCCCGAGGCGTTCACCTCGGCATTCCTCGTACCGGCGATGACACGGCTGCAGCAGGAGCATCCGGGGCTGGCGATCGAGCTGCTGGCGGCGACGCAGCGGGTGCGGCAGAACCGCTCCGGCGTCGACCTCGAGGTGGTGGTGGGCCGACCACAGGTGCACCGGGCGTTCGCGACGCCGGTGTGCGACTATTCGCTGCGGCTGTATGCGAGCGCTGCCTACCTCGACGCGCGGGGGACGCCGTCGGGCATCGAGGCGCTGGGGCAGCATCCGGTGATCTACTACGTGGAGTCGTCGCTGCAGGTGGACGACCTCGACCGGGCCGTGCAGAAGCTGCCGCCCTCTCCTCCGTCGATCCGCTCGACGAGCGTGTTCGCGCACGTCGAGGCGACGGCCGCCGGTGCCGGGATCGGCGTGCTGCCCGACTTCCTGGCCGATCGCGACGATAGGCTCACACCCGTGCTGCGCGACGAGTATGCGCATCCGCTGTCGTACTGGGCGGTCGTGCGCGATGAGGGTCCACGAAACGCCGCCGTTGCCGCCACGCTGGCGGCGCTGCGCGGCTATGCAGGGGTCGCCGCCGACTGA
PROTEIN sequence
Length: 284
MTFLAVARLGRYTAAAEVLGMNHSTVSRRIAALEQAMGGRILVRTAGGWEITELGRRAMAAAEGIEASLRVLGEDTGGDPVQGMVRIAAPEAFTSAFLVPAMTRLQQEHPGLAIELLAATQRVRQNRSGVDLEVVVGRPQVHRAFATPVCDYSLRLYASAAYLDARGTPSGIEALGQHPVIYYVESSLQVDDLDRAVQKLPPSPPSIRSTSVFAHVEATAAGAGIGVLPDFLADRDDRLTPVLRDEYAHPLSYWAVVRDEGPRNAAVAATLAALRGYAGVAAD*