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SCNpilot_solid_1_scaffold_8216_1

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 3..416

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NBC7_MICTS similarity UNIREF
DB: UNIREF100
  • Identity: 73.7
  • Coverage: 137.0
  • Bit_score: 207
  • Evalue 7.20e-51
ECF RNA polymerase sigma factor SigL {ECO:0000313|EMBL:KJL32933.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirach similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 137.0
  • Bit_score: 217
  • Evalue 1.70e-53
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog similarity KEGG
DB: KEGG
  • Identity: 73.7
  • Coverage: 137.0
  • Bit_score: 207
  • Evalue 2.00e-51

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Taxonomy

Microbacterium azadirachtae → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 414
GCGGGCGCCGACGACATCGTGCAGGAGACGCTGCTGCGGGCCTGGCGCAGCCCGCGCATCCTCGAGCAGGACCCGTCGGCCGCACGTGCCTGGATGATCACCGTGGCCCGGCACCTCGTGATCGACGAGGCGCGCAGCGCGCGGCGGCGGCACGAGCACCCCATGGCCGAGCCGCCCGAGCACGGCGAGGGCGACGAGGTCGATCGGCTGTTCGAGGCGATCCTCGTCGAGGAGGCCTTGCACACCCTCAGCGACGAGCATCGCGCGGTGATCGTGGCGGCCTACTACGCGGGCCGCAGCGTCGCGCAGATCGCCGACGACCTCGGCATCCCCGGCGGCACCGTGAAATCGCGCCTGCACTACGGGCTGCGGGCCCTACGGCTCGCCTTGCAGGAGAGAGGAGTGACGCGATGA
PROTEIN sequence
Length: 138
AGADDIVQETLLRAWRSPRILEQDPSAARAWMITVARHLVIDEARSARRRHEHPMAEPPEHGEGDEVDRLFEAILVEEALHTLSDEHRAVIVAAYYAGRSVAQIADDLGIPGGTVKSRLHYGLRALRLALQERGVTR*