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SCNpilot_solid_1_scaffold_8293_4

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(1302..1991)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=1 Tax=Microbacterium sp. B19 RepID=UPI00034D7A2B similarity UNIREF
DB: UNIREF100
  • Identity: 94.8
  • Coverage: 229.0
  • Bit_score: 428
  • Evalue 3.30e-117
  • rbh
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 229.0
  • Bit_score: 430
  • Evalue 2.10e-117
rplA; 50S ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 93.0
  • Coverage: 229.0
  • Bit_score: 422
  • Evalue 6.70e-116

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Taxonomy

Microbacterium oxydans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGGCTACCAAGTCCAAGGCTTACAAGGCCGCCGCCGAGAAGATCCAGGCAGACACGTTCTACACGCCGACCGACGCTGTCGCGCTCGCGAAGGAGACCGGGTCGAAGAAGTTCGACTCGACCGTCGAGGTCGCCCTCAAGCTCTCGGTCGACCCGCGAAAGGCCGACCAGATGGTCCGTGGCACCGTCATCCTGCCGCACGGCACCGGCAAGACCGCGCGCGTCATCGTGTTCGCGACCGGTCCCGCCGCCGAGGCCGCCATCGCCGCGGGCGCCGACGAGGTCGGCGGCGCTGAGCTCATCGAGAAGGTCGCCGGCGGCTGGACGTCGTTCGACGCGGCCGTCGCCACGCCCGAGCTCATGGGCCAGGTCGGTCGCCTCGGCAAGGTGCTGGGTCCGCGTGGTCTGATGCCGAACCCGAAGACCGGCACGGTCACCCCCAACCCGGCCAAGGCCGTGGAGGAGATCAAGGGCGGCAAGATCGAGTTCCGCGTCGACAAGCACGCCAACGTGCACTTCGTCGTCGGCAAGGCGTCGTTCACCGCCGAGCAGCTCGACGAGAACCTCAAGGCCGCGCTCGAGGAGATCGTGCGTCTGAAGCCGGCCAGCTCCAAGGGCCGCTACATCCAGAAGGGCGCCGTGTCGACCACGTTCGGTCCCGGCATCCCGCTGGACGTCAACGCCATCTGA
PROTEIN sequence
Length: 230
MATKSKAYKAAAEKIQADTFYTPTDAVALAKETGSKKFDSTVEVALKLSVDPRKADQMVRGTVILPHGTGKTARVIVFATGPAAEAAIAAGADEVGGAELIEKVAGGWTSFDAAVATPELMGQVGRLGKVLGPRGLMPNPKTGTVTPNPAKAVEEIKGGKIEFRVDKHANVHFVVGKASFTAEQLDENLKAALEEIVRLKPASSKGRYIQKGAVSTTFGPGIPLDVNAI*