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SCNpilot_solid_1_scaffold_9330_2

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 680..1204

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=1 Tax=Microbacterium yannicii RepID=UPI000319A8AB similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 172.0
  • Bit_score: 249
  • Evalue 2.70e-63
Cold-shock protein DNA-binding protein {ECO:0000313|EMBL:EIC07514.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevan similarity UNIPROT
DB: UniProtKB
  • Identity: 67.3
  • Coverage: 171.0
  • Bit_score: 222
  • Evalue 3.80e-55
cold shock proteins similarity KEGG
DB: KEGG
  • Identity: 94.0
  • Coverage: 67.0
  • Bit_score: 133
  • Evalue 4.70e-29

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Taxonomy

Microbacterium laevaniformans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 525
ATGTCATCCGTTCTCCCGTCCACATCGGCCGTGCAGTGGCGCCAGGCCGACGTCGACGTGTTCGTCGCATACCTTGCCGGTGAATACGCGGGTTTCGTCGGTGTCACCCCGCGCGCATACGAGGCGCGCGGAAGCCGAGGCGAAGACCTCGGCCTGCACTCCACGCGCGATGCCGCGACCGTCGCGGTCGAGGCATCCGCGCTCATCCCCGCACTCGCGACCACGGACCTCACCCGTCGTCGCCCCCGTCGTCCGCTCCGCACTCGCCGGCGCGGCACCCCTGGTCGCCCCGGCGGCCCGAACAACAGAAGGAAAGACACGATGGCCACTGGCACCGTGAAATGGTTCAACTCCGAGAAGGGCTACGGCTTCATCGCCCCCGACGACGGCTCCGCCGACCTGTTCGCGCACTACAGCGCGATCACGGGCAACGGCTTCAAGGAGCTGCGCGAGGCGCAGAAGGTGGAGTTCGACGCCGAGCGCGGCCCGAAGGGCATGCAGGCAGCCAACATCCGCCCGCTCTGA
PROTEIN sequence
Length: 175
MSSVLPSTSAVQWRQADVDVFVAYLAGEYAGFVGVTPRAYEARGSRGEDLGLHSTRDAATVAVEASALIPALATTDLTRRRPRRPLRTRRRGTPGRPGGPNNRRKDTMATGTVKWFNSEKGYGFIAPDDGSADLFAHYSAITGNGFKELREAQKVEFDAERGPKGMQAANIRPL*