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SCNpilot_solid_1_scaffold_13987_1

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 2..1555

Top 3 Functional Annotations

Value Algorithm Source
type VI secretion protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B5D895 similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 505.0
  • Bit_score: 801
  • Evalue 4.20e-229
Type IV secretory system Conjugative DNA transfer {ECO:0000313|EMBL:KJL39028.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacter similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 517.0
  • Bit_score: 1012
  • Evalue 2.20e-292
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 71.5
  • Coverage: 506.0
  • Bit_score: 723
  • Evalue 5.40e-206

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Taxonomy

Microbacterium ginsengisoli → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1554
CTGCTCGCCGCCATCGGTACCGCGGCGTGGTTCATCTGGCGATGGGTGCGCGAGCTGGGCAAGCGGACCAAGGCCGACCCGAACCGGATCGAGGGAATCGCCGACGCGCGCGACGTGCAGCGCGCCGCATCCGAACGCGACCTTCTGCGTCGCGCGACGACGCTGCGCCCCTCGCTCACCGAGCCGAAGCCCGAGGAGGTCGGCTACCTCCTTGGAACCTCGCGCGGCAAGCGCGTGTGGACATCCGTCGAGGACTCGATCCTGCTGATCGGCCCGCCGAGATCCGGCAAGGGCGCGAACATTGTCATCAACACCATCCTCGACGCGCCCGGTGCGGTCATCACGACCTCGACCCGGCCAGACAACCTCACGGCGACGCTCCGCGCCCGCCAGTCGCACGGCGGCCCAGTCTCCGTGTTCGATCCCCAGCACCTCGCCGAGGGCGTGCCCGCGGGTCTGCGGTGGTCACCGATCCGCGGGTGCGAGGTGCCCCTGACCGCGATGATCCGCGGCACAGGTCTCGCCGCGGGAACCGGGCTCTCCGGCCCCTCTGTCGAGAACGGCGGATTCTGGGAAGGCAAGACGCGCACGGCGCTACAGGCGCTTCTGCACGCCGCGGCGCTCGATCACCGGCAACCCGCCGAGCTATTCCGCTGGACGCTCGACCCTGCGGCTGCGGCGGATGCCGTCTCCATTCTCGCGTCGCACCCCCACGCCGCGACCGGATGGGCCGAGTCGCTCGACGGGATGCTGCAATCCGACCCTCGCACCCGCGACTCCATTTGGCAGGGCGTCTCGCTCTCCCTCGCCTCGCTCGCCGACCCACGGGTGCTGGAGGCGGTCAGCCCCAGCGAGGACGAGCAGTTCGACCCCGAGGCGTTCCTGCGCGGGTCCGGCACGCTTTACCTGCTGGCGACAGGAGCCGGAGCGGGGGCGTCCTCGTCGCTCGTCGCGGCGTTCATCGAAGACCTCGTAGAGACGGCTCGGCGCATCGCCGCGCGCTCGCCGGGCGCGCGGCTCGATCCGCCTGTGCTGCTCGCGCTCGACGAGATCGGGAACCTCGCGCCTCTGCCTTCGCTTCCGGTCCTCATGGCGGAGGGCGGCGGCACCGGGCTCACGGTGATGCCCGTGTTCCAGTCGCTCGCCCAGGCGCGAGGTCGTTGGGGCGACGACGCCGCGACCGCGATGTGGGATGCGAGCATCACCAAGATCGTCCTCGGCGGCGGGACGGACACACGGCACCTCCAGGACATCTCCACACTGATCGGCGAACGCGACGAGACGACTGACTCCGTGACCATCGGGGAGCGCGGCTTGCGCTCGAACCAACGCTCGATCCGCCGCGTCCCGATCATGAAGGTCGAAGACATCCGCACCCTGCCCCAGGGCACCTCGCTCGTGTTGCTGCGCTCCGCGCCGCCGATCATCACGACCATGCGTTACTGGCTCCATCGGCCGGAAGCCGAGACGCTGCTCGCCCAGCGCGCCGAGGTCGAGGCGATCATGCGGCCGGGCACCGCAGGGATAGGTGAGGCAACAGTCACCGACGACTGA
PROTEIN sequence
Length: 518
LLAAIGTAAWFIWRWVRELGKRTKADPNRIEGIADARDVQRAASERDLLRRATTLRPSLTEPKPEEVGYLLGTSRGKRVWTSVEDSILLIGPPRSGKGANIVINTILDAPGAVITTSTRPDNLTATLRARQSHGGPVSVFDPQHLAEGVPAGLRWSPIRGCEVPLTAMIRGTGLAAGTGLSGPSVENGGFWEGKTRTALQALLHAAALDHRQPAELFRWTLDPAAAADAVSILASHPHAATGWAESLDGMLQSDPRTRDSIWQGVSLSLASLADPRVLEAVSPSEDEQFDPEAFLRGSGTLYLLATGAGAGASSSLVAAFIEDLVETARRIAARSPGARLDPPVLLALDEIGNLAPLPSLPVLMAEGGGTGLTVMPVFQSLAQARGRWGDDAATAMWDASITKIVLGGGTDTRHLQDISTLIGERDETTDSVTIGERGLRSNQRSIRRVPIMKVEDIRTLPQGTSLVLLRSAPPIITTMRYWLHRPEAETLLAQRAEVEAIMRPGTAGIGEATVTDD*