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SCNpilot_solid_1_scaffold_11866_2

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(2951..3361)

Top 3 Functional Annotations

Value Algorithm Source
transcription antitermination protein NusB n=1 Tax=Microbacterium yannicii RepID=UPI00031A62B0 similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 136.0
  • Bit_score: 228
  • Evalue 3.00e-57
nusB; transcription termination factor similarity KEGG
DB: KEGG
  • Identity: 82.4
  • Coverage: 136.0
  • Bit_score: 226
  • Evalue 4.20e-57
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=979556 species="Bacteria; Actin similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 136.0
  • Bit_score: 226
  • Evalue 2.10e-56

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Taxonomy

Microbacterium testaceum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 411
ATGAGCGCACGCACCAAGGCGCGCAAGCGCGCCATGGACATCCTGTTCCAGTCCGACGTCCGCGGCGAGCGGATCGCGACGATCCTCGCCGCCGAGGCGACCCGCGCCGCCACCGAGCCCGCCCGCGAGGCGTCCTGGCTGTACGCGCGGGAGATCGTCGACGGCGTGATCGACAACCAGGGTGAGATCGACGAGCAGATCAGCACCTTTGCGAAGGACTGGTCGCTCGAGCGGATGCCGGCCGTCGACCGCGCGCTGCTGCGCATCGGAGCGTGGGAGATCCTGTTCAACGACGAGGTCCCCACCGCGGTCGCCATCGACGAGGCCGTGGAGCTCGCCAAGGAGTTCTCCACCGAGGAGTCGGGGTCGTTCATCCACGGGGTGCTCGCCCGCATCGACCGCTCGTCCTGA
PROTEIN sequence
Length: 137
MSARTKARKRAMDILFQSDVRGERIATILAAEATRAATEPAREASWLYAREIVDGVIDNQGEIDEQISTFAKDWSLERMPAVDRALLRIGAWEILFNDEVPTAVAIDEAVELAKEFSTEESGSFIHGVLARIDRSS*