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SCNpilot_solid_1_scaffold_16980_3

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(1219..1716)

Top 3 Functional Annotations

Value Algorithm Source
MarR family transcriptional regulator n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036349D4 similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 165.0
  • Bit_score: 282
  • Evalue 3.60e-73
HTH-type transcriptional repressor NicR {ECO:0000313|EMBL:KJL34873.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsen similarity UNIPROT
DB: UniProtKB
  • Identity: 89.1
  • Coverage: 165.0
  • Bit_score: 285
  • Evalue 3.50e-74
marR; transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 83.2
  • Coverage: 161.0
  • Bit_score: 267
  • Evalue 2.60e-69

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Taxonomy

Microbacterium ginsengisoli → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 498
ATGGCGCAGTTGAGCGACGAGGTCGACAGGATCGTCGAGGCATGGGACCGGCAGCGGCCCGATCTCGACTTCTCGCCTCTAGAGGTGCTCTCCCGTGTCGATCGGCTCTCGCGTCACCTCGACCGCGCGCGACGCGATGCGTTCCGGCGCAGCGAGCTCGAGCCGTGGGAATGGGATGTGCTCTCGGCGCTGCGGCGGGCGGGCGAGCCGTTCCAGCTCACGCCCAAGCAGCTGCTGCAGCAGACGCTCGTGTCGTCGGGCACGATGACCAACCGCATCGACCGCCTGGTCGGCCGCCGGCTCGTGCATCGCGAGGCCGATCCCGGCGACGGCCGCAGCATCCTGGTGGTGCTCACGCACGACGGGAAGATCCGGGTGGATGCCGCCATCACGCGTCTGGTCGATGCGGAGGCGGTGCTGCTGTCCCGGTTGTCGCGCACCGACCGCGAACGGCTGGCGGCCCTGCTGCGCAAGCTCAGCCTCGGCTTCGACACCTGA
PROTEIN sequence
Length: 166
MAQLSDEVDRIVEAWDRQRPDLDFSPLEVLSRVDRLSRHLDRARRDAFRRSELEPWEWDVLSALRRAGEPFQLTPKQLLQQTLVSSGTMTNRIDRLVGRRLVHREADPGDGRSILVVLTHDGKIRVDAAITRLVDAEAVLLSRLSRTDRERLAALLRKLSLGFDT*