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SCNpilot_solid_1_scaffold_19028_1

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 3..1202

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1348253 speci similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 400.0
  • Bit_score: 725
  • Evalue 5.50e-206
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003137E03 similarity UNIREF
DB: UNIREF100
  • Identity: 94.7
  • Coverage: 399.0
  • Bit_score: 738
  • Evalue 3.40e-210
rho; transcription termination factor similarity KEGG
DB: KEGG
  • Identity: 91.7
  • Coverage: 399.0
  • Bit_score: 708
  • Evalue 8.20e-202

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Taxonomy

Microbacterium mangrovi → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1200
GAGATCGGCGAGGACGACGTGCTCATCCCGGTCGCCGGCATCCTCGACGTCCTGGACAACTACGCGTTCGTGCGCACGACCGGTTACCTGCCTGGCGCCAGCGACGTGTACGTCTCCCTCGGGCAGGTCAAGAAGTACAACCTGCGCAAGGGCGACGCGATCGTCGGTGCCATCAAGCAGCCGCGCGAGGGCGAGCAGTCCGGTCGGCAGAAGTACCACGCACTGGTCAAGGTCGACTCGATCAACGGCCTGAGCACCGAGGATGCCGCGACCCGCGTGGAGTTCTCGAAGCTGACCCCGTTGTACCCGCAGGAGCGGCTGCGCCTGGAGACGGCGCCGGAAAAGCTCACGCAGCGCATCATCGATCTGATCGCCCCGATCGGCAAGGGTCAGCGCGGCCTCATCGTGGCGCCGCCCAAGGCCGGCAAGACGATCGTGCTGCAGCAGATCGCGAACGCGATCGCGATCAACAACCCCGAGGTGCACCTCATGGTCGTGCTCGTCGACGAGCGCCCCGAAGAGGTCACCGACATGCAGCGCACGGTCAAGGGCGAGGTCGTCGCCTCGACGTTCGACCGTCCCGCTGAGGACCACACCACGGTGGCCGAGCTTGCCATCGAGCGCGCCAAGCGTCTTGTCGAGCTGGGTCGCGACGTGGTCGTGCTGCTGGACTCGATCACGCGCCTCGGCCGTGCCTACAACGTGTCGGCACCCACCAGCGGACGCGTGCTCACCGGCGGTGTCGACGCCTCGGCCCTGTACCCGCCCAAGCGCTTCTTCGGCGCCGCGCGCAACATCGAGAACGGCGGCTCGCTGACGATCCTGGCGACCGCGCTGGTGGAGACCGGGTCGAAGATGGACGAGGTCATCTTCGAGGAGTTCAAGGGCACGGGCAACAGCGAGCTGCGCCTGTCGCGGCAGCTGGCCGACAAGCGCATCTTCCCGGCCGTCGACGTGAACGCGTCCAGCACTCGCCGTGAGGAGATGCTGCTGAGCCCCGACGAGGTCAAGATCACCTGGAAGCTGCGCCGCGCCCTTGCCGGCCTGGATCCGCAGCAGGCCCTCGAGGTGGTGCTGGGCAAGCTCAAGGAGACTCAGTCCAACGTCGAGTTCCTCGTGCAGATGCAGAAGTCGATCCCCGCGCCGGCTCCGAACCACGCCGGCGGGCACAGCCACGGACACGAGAACAGCATCCGCTGA
PROTEIN sequence
Length: 400
EIGEDDVLIPVAGILDVLDNYAFVRTTGYLPGASDVYVSLGQVKKYNLRKGDAIVGAIKQPREGEQSGRQKYHALVKVDSINGLSTEDAATRVEFSKLTPLYPQERLRLETAPEKLTQRIIDLIAPIGKGQRGLIVAPPKAGKTIVLQQIANAIAINNPEVHLMVVLVDERPEEVTDMQRTVKGEVVASTFDRPAEDHTTVAELAIERAKRLVELGRDVVVLLDSITRLGRAYNVSAPTSGRVLTGGVDASALYPPKRFFGAARNIENGGSLTILATALVETGSKMDEVIFEEFKGTGNSELRLSRQLADKRIFPAVDVNASSTRREEMLLSPDEVKITWKLRRALAGLDPQQALEVVLGKLKETQSNVEFLVQMQKSIPAPAPNHAGGHSHGHENSIR*