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SCNpilot_solid_1_scaffold_24993_1

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(2..1282)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Janibacter hoylei PVAS-1 RepID=K1E2V0_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 50.7
  • Coverage: 436.0
  • Bit_score: 410
  • Evalue 1.70e-111
Type VI secretion protein {ECO:0000313|EMBL:KGM17834.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JC similarity UNIPROT
DB: UniProtKB
  • Identity: 54.8
  • Coverage: 431.0
  • Bit_score: 438
  • Evalue 8.40e-120
Type IV secretory pathway VirD4 protein-like protein similarity KEGG
DB: KEGG
  • Identity: 51.0
  • Coverage: 433.0
  • Bit_score: 402
  • Evalue 1.70e-109

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Taxonomy

Actinotalea fermentans → Actinotalea → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1281
GTGACCACCCGCGTGAAGACCGCCGGATCGAACGGCTCGGACACCGCTCTTGCCGCGCTCATCCTGGGCGCGGCGGGCGTGGTCGGCGCGTTGTGGGTCGGCGGCGCCGCCGCCGGACTGCTGACCGGCCGTACTCCCCGCGGCGCACTGCTGGCCGGCATCCGCGCACTGGCCCACTTCTCCCAGCCCGCGGTGGTGTGGAACTCGCCGATGCCCGGACCGGCCGCCTATTGGACCGTGACCGCGCTGGTGCTGGCCGCCGGCGCCACAGTCGCGCTGCTGGTGGTGCGGCGCTTCGACGTCGGCCCAGCACCGGCGGACGTGTTCCGCCTGCCGGGAACCGCCACCCGCACTCAACTGCGCCGCACCTGCTCCCGCCGTGCCGTGAAACGCCGGGGCCGGATGCTTCGACCGTCGATCCACCGGCCCTACCCGACCGAGGTCGGCTTTCGCATCGGCGCCAGCCGCTGTGTCGGCGTGTGGTCGTCGGTGGAGGACTCCATCGCCGTGGTCGGCCCGGCCCGATCGGGCAAGGACCTGCACCTGGTCGTCAACGTCATCCTGAGCGCCCCCGGCGCAGTGATCGCCACCTCCACCCGGCCGGACAACATCCACCAAACCATCACCGCCCGAGCCGAGGTCGGCCCGGTCGCGGTGTTCGACCCGCAACACCTCGCCGGAGACACACCTGCCGGTTTGCGCTGGTCACTGACGAGGGGCTGCGAGCAGCCGATGACGGCGATGATCCGCGCTGCCGCTCTGGCCGCGGGCACCGGCAACGGCGTCGACGACGGCGACTTCTGGCGCGGCCAAACCGAAGCCGCCCTCCGCGCGTTGTTGATGGCCGCAGCCCTGGAACACCGCGGCGCGCGGGATCTGTACCGGTGGTCGCTGACTCCCGCGTCGGTGCAGGATGCGATCGCGATCCTCGACTCCCATCCCCGCGCCCCGGCCGGGTGGGCCACCGCCCTGACCGCCGTGGCCGATTCGGATCCGCGGCAGCGGGACTCCGTGTGGATGGGGGTGCGGCAGTCCCTGGCCGCCCTGGGCGATCCGAACGTGCTGGCCGCCGTCACCCCGACGTCGGCCGAGCAGTTCGACCCCGCCGCGTTCATCACCGGGAAGGGCACGCTGTATCTGGTGGGCACGTCCACCGGTGCCGGCGCCGCCGCCAACCTCGTCTCCGCTCTGGTGGAGGACATTCTGGACGTCGCCCGCCATCTCGCCGCCGCATCCCCGGGTGCCAGGCTGGACCCTCCGGTGACGGTGATGCTCAACGAG
PROTEIN sequence
Length: 427
VTTRVKTAGSNGSDTALAALILGAAGVVGALWVGGAAAGLLTGRTPRGALLAGIRALAHFSQPAVVWNSPMPGPAAYWTVTALVLAAGATVALLVVRRFDVGPAPADVFRLPGTATRTQLRRTCSRRAVKRRGRMLRPSIHRPYPTEVGFRIGASRCVGVWSSVEDSIAVVGPARSGKDLHLVVNVILSAPGAVIATSTRPDNIHQTITARAEVGPVAVFDPQHLAGDTPAGLRWSLTRGCEQPMTAMIRAAALAAGTGNGVDDGDFWRGQTEAALRALLMAAALEHRGARDLYRWSLTPASVQDAIAILDSHPRAPAGWATALTAVADSDPRQRDSVWMGVRQSLAALGDPNVLAAVTPTSAEQFDPAAFITGKGTLYLVGTSTGAGAAANLVSALVEDILDVARHLAAASPGARLDPPVTVMLNE