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SCNpilot_solid_1_scaffold_49141_3

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 731..1429

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003813DFF similarity UNIREF
DB: UNIREF100
  • Identity: 49.1
  • Coverage: 220.0
  • Bit_score: 183
  • Evalue 2.50e-43
Peptidoglycan-binding protein LysM {ECO:0000313|EMBL:KDA06339.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i. similarity UNIPROT
DB: UniProtKB
  • Identity: 51.1
  • Coverage: 182.0
  • Bit_score: 149
  • Evalue 5.50e-33
conserved secreted protein,peptidoglycan-binding similarity KEGG
DB: KEGG
  • Identity: 43.6
  • Coverage: 220.0
  • Bit_score: 139
  • Evalue 8.80e-31

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Taxonomy

Microbacterium sp. CH12i → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 699
GTGCCTGATTCGCACTCCGCCATCCGCCGTACGACCGCAGCGGCTCTTCCGGCCGCCATCGCCGGTTCACTGGCTCTTTCTCTGGCGGGCGGCCCTGCCGCGCACGCCGACGACACCGGAGTGCAGCGCACCCGCATCCCGCTGGCTCCGGCCACGCCCGAGGCGACACCGCACACGGTCAGTGGATTGAGCGTGGCATCCATCCTGGGAACGGCCCTGGTCATGGCCAAGGGCGCACCGGCGACCTACCGCATCGTGCGCGGTGACACGATCTCGGCGATCGCGGCACGTCACGGCCTGCGCACCGCAGACCTGCTCGCGTGGAATGGAATGGGGTGGTCCACCGTGATCTATCCGGGGCAGGTGATCCGTCTGACTCCTCCGTCGTCGACGGCGAAGGCGCCGGCGCCCGCGTCGACGCACAGCGCCAAGCCGGCCGCGAGGAGCACGGCGAAGGCCACGACGTCCACCCGCTACACCGTGCGCAACGGCGACACCGTCAGCTCGATCGCACGCCATCACGGCCTGTCCACGCAGGCCGTGCTCAACGCGAACAAGCTGCGCTGGTCGTCGATCATCTACCCTGGGCAGAAGCTCGTGATCCCTGACACGGCGGCGCCGGCCGCGGCGCCGGCGAAGCCCGCCGCCAAGGCCGCACCCAAGACGCCCGCACCGGCCAAGGCCGCAGCCCCGCAGCCG
PROTEIN sequence
Length: 233
VPDSHSAIRRTTAAALPAAIAGSLALSLAGGPAAHADDTGVQRTRIPLAPATPEATPHTVSGLSVASILGTALVMAKGAPATYRIVRGDTISAIAARHGLRTADLLAWNGMGWSTVIYPGQVIRLTPPSSTAKAPAPASTHSAKPAARSTAKATTSTRYTVRNGDTVSSIARHHGLSTQAVLNANKLRWSSIIYPGQKLVIPDTAAPAAAPAKPAAKAAPKTPAPAKAAAPQP