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SCNpilot_solid_1_scaffold_76212_1

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(1..1083)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 94.7
  • Coverage: 361.0
  • Bit_score: 673
  • Evalue 2.20e-190
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Microbacterium barkeri RepID=UPI0002E152F6 similarity UNIREF
DB: UNIREF100
  • Identity: 92.0
  • Coverage: 364.0
  • Bit_score: 655
  • Evalue 3.40e-185
rpoC; DNA-directed RNA polymerase, beta' subunit/160 kD subunit similarity KEGG
DB: KEGG
  • Identity: 88.5
  • Coverage: 364.0
  • Bit_score: 630
  • Evalue 3.30e-178

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Taxonomy

Microbacterium azadirachtae → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1083
ATCGCCGGTATGCGCGGTCTGGTGAACAACCCGAAGGGTGAGCTCATCCCGCGTCCGATCATCTCCTCGTACCGCGAGGGTCTGTCGGTGGCGGAGTACTTCATCGCGACGCACGGTACCCGTAAGGGTCTGGCCGACACCGCTCTGCGCACCGCTGACTCGGGTTACCTGACCCGTCGTCTGGTGGATGTCTCGCAGGACGTCATCATCCGTGAGGACGACTGCGGCACGTCGAAGGGCCTGGAGCTTCCGATCGCCGTGCGCAACGCCGCCGGTGAGCTGGTCCGCGAGGCCAACGTGGAGAACTCCGTGTTCGCCCGCACCCTGGCATCCGACGCGGTGAACGAGGCCGGCGAGGTTCTCGCCACCGCCGGTGAGGACGTCGGCGACGTGCTCATCGACAAGCTCGTCGCGGCCGGTGTCGAGACGATCAAGGTCCGCTCCGTGCTGACCTGCGACTCGGCCGTCGGTGTCTGCGCGCAGTGCTACGGCCGCTCGCTGGCCACCGGCAAGACGGTGGACATCGGTGAGGCCGTGGGCATCATCGCGGCCCAGTCGATCGGTGAGCCCGGTACCCAGCTGACGATGCGTACCTTCCACCTCGCCTCCGCGGGTGACATCACGCAGGGTCTGCCCCGTGTGCAGGAGCTCTTCGAGGCCCGTACCCCGAAGGGCGCCACCCCGATCGCCGAGGCCGACGGCCGCATCACGATCGAGGAGACCGACAAGTCGAAGAAGGTCATCCTCACGCCCGACAACGGCGACGAGGAAGTGGTCTACCCGGTGCTGAAGCGTGCGACGCTTCTCGTCGAGGACGGCCAGCACGTCACGGTCGGTCAGCCCCTGCAGGTCGGCACGCTCGACCCCAAGGAGGTCATGCGCGTCATGGGTGCCCGCGAGGTGCAGAAGTACCTCGTCGGCGGCGTGCAGGGCGTGTACCGCTCGCAGGGTGTGCCGATCCACGACAAGCACATCGAGGTCATCGTGCGCCAGATGCTGCGCAAGGTCACCGTGGTCGACCACGGCGACACCGCGCTGCTCCCCGGCGAGATGGTCGACCTGAAGCGCTACCAGCAGATCAAC
PROTEIN sequence
Length: 361
IAGMRGLVNNPKGELIPRPIISSYREGLSVAEYFIATHGTRKGLADTALRTADSGYLTRRLVDVSQDVIIREDDCGTSKGLELPIAVRNAAGELVREANVENSVFARTLASDAVNEAGEVLATAGEDVGDVLIDKLVAAGVETIKVRSVLTCDSAVGVCAQCYGRSLATGKTVDIGEAVGIIAAQSIGEPGTQLTMRTFHLASAGDITQGLPRVQELFEARTPKGATPIAEADGRITIEETDKSKKVILTPDNGDEEVVYPVLKRATLLVEDGQHVTVGQPLQVGTLDPKEVMRVMGAREVQKYLVGGVQGVYRSQGVPIHDKHIEVIVRQMLRKVTVVDHGDTALLPGEMVDLKRYQQIN