ggKbase home page

scnpilot_solids1_trim150_scaffold_437_26

Organism: SCNPILOT_SOLID_1_TRIM150_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 16
Location: comp(28286..30325)

Top 3 Functional Annotations

Value Algorithm Source
Secreted pectate lyase n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7VA09_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 33.3
  • Coverage: 396.0
  • Bit_score: 199
  • Evalue 1.30e-47
Secreted pectate lyase {ECO:0000313|EMBL:EPR66751.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.3
  • Coverage: 396.0
  • Bit_score: 199
  • Evalue 1.80e-47
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 33.1
  • Coverage: 366.0
  • Bit_score: 150
  • Evalue 2.10e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Cyclobacterium qasimii → Cyclobacterium → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2040
GTGATCGAAAGCAAGCAGTCCGTTAACCTCCTGAACGACCCACGACGTGTAAAGCCGCGGAAGCGGAAGGGGGCTGGCTTTCGCGTGGCAATGCTTCTCCTTCTTTTCGTCGCCCTTTGGGGCTGCGCGCGGGTATCCCCATCCGGCGAGGTGGAGCCCCCCGAACCAAGAAGGCCCGAGTGGCGCGCCTCAGACATCGGAACCGTGACGCTTAGCGGCGCCTTCGAGTTCCTAGACAGGAACCTGGGCGACTTCGTCCTATCTGGAAGTGGACTCGACATCTGGGATCCCGCCGACAGCTTCTACTTCCTTTACAAGGAGTACACGGGCGATTTCGACGTGATCACGAGGGTCTCCGACATCCTTGACACCCATAGTTGGGCGAAGGCCGGGCTCATGGTAAGGGCGAGCACCGACCCGGACTCGGCCCACGCCCTGGTATCCCTCACCCCGCGGGGCGTAACAGAGTTCATCTTCCGCACCACACATGGGGGCCCTTCCGATTTCGACCTCAACTACGACTTCAGCGACCCGAGCGGGCTCAAGCAACCCCTGTGGCTGAGGCTCTCCAGGAGCGGCGAGTCGCTCAGCGGCTACGTGTCGACCGACGGGGACACCTGGGAGTTCGTCGGCGACGCCGACATCACCTTGAGTAGCAAGGTTCTTGTCGGCGCCGCGGTCAGCAGCCGGAACGCTGCTGAACGGACACGCGCCCACTTCGTGGACTACACCATCGCGCGCCCCAATGGCGACCCGGTGGAACCCATACCCACGCCGAACCCCGATCCAACGCCCAACCCCAATCCCACCCCGGATCCGACGCCTACCCCCGAACCTACTCCCGACCCGACCCCCACGCCCGAACCCACTCCAACACCCACCCCCGAACCGACGCCCCCACCGGCCCTCCCGCTACCGACATCCGGGTGGGTGTGCCCCACCACGCCGCTATCGCCTTCCTACGCGGGAACCATCTTCGTCGATGCTTCGAGCGGCAGCGACCAGGGCAGCGGCGCGTTCTCCCAACCACTCAGATCGGTTCAAGCCGCGGTCAACCGCGCCAGACCAGGTGACGTGGTCCAGCTGCGCGGGGGAACCTACCCCATCGGCTTCACCGTCCGGAACTCCGGAACCGCAGCGGCGCCGATCGTCGTCGAGTCCTACCCCGGGGAGTGCGCCATCCTTGACGGCAGCGGCTACAGAAACGGCGAGCGGGTCGTTCTGGAGGACGTGCAGTACGTCATGCTCCGCAACTTGGTCGTGCGCAACTCCTCGCATGAGGGCGTGCTCGTTACGGGCGGCAACAACAACACCGTCTCAAACCTGCAGATGTACGCGAACCATTACAGTGGTCTGACCATCCTTAACAGCAGCAACAACAGCCTCAGGTACCTAATCAGCCACGACAACTACGACGGCTCTGGGGGCGGCGACTCCGACGGCATCAGCATCTCGACCGGCTCTGGGAACCGGCTCTCCTACTGCCTCGTCTACCGCAACTCCGATGACGGCGTCGATACTTGGCGTTCGACGGGTACGGTGGTGGAGCGCTGCATCAGCATCGCCAACGGCTTCCAGGGAGGCAACGGTGTCGGCTTCAAGATGGGATCGCCTGGATACACCGTCGGTACCACCGTGCAGTTCTCGATCGCGCACGGCAACAAAACCAACGGGTTCGACAACAACCAAGCCAATGACGTGACATTCATCAACAACACGTCTATAGGCAATGAGGCGTACAACTACAGCGTAGGTAACGCCAGCTCGATCACGAACAGCCTCTCCGTCAACGGGAAGGTGGCCATATGGACGGGCGCCTCGGGCGACAGGGTCAGCAGCCACCACAACAGCTGGGATCTCGGTCTCTCAGAAGGCAGCCTCCTCTCGGCCACAGACCTCAGCAACCCGTGGTACGCCACGCTTGCCACCGGTAGCCCGGGCCGCGGTGTCGGCGTGAACGGAGCCGACCTAGGGGCCCTCGCCTACGGCAGTTCGATCGAGAAAGCGCTCGGACTGATCCTCTCGGATTTCCTCAAGTAG
PROTEIN sequence
Length: 680
VIESKQSVNLLNDPRRVKPRKRKGAGFRVAMLLLLFVALWGCARVSPSGEVEPPEPRRPEWRASDIGTVTLSGAFEFLDRNLGDFVLSGSGLDIWDPADSFYFLYKEYTGDFDVITRVSDILDTHSWAKAGLMVRASTDPDSAHALVSLTPRGVTEFIFRTTHGGPSDFDLNYDFSDPSGLKQPLWLRLSRSGESLSGYVSTDGDTWEFVGDADITLSSKVLVGAAVSSRNAAERTRAHFVDYTIARPNGDPVEPIPTPNPDPTPNPNPTPDPTPTPEPTPDPTPTPEPTPTPTPEPTPPPALPLPTSGWVCPTTPLSPSYAGTIFVDASSGSDQGSGAFSQPLRSVQAAVNRARPGDVVQLRGGTYPIGFTVRNSGTAAAPIVVESYPGECAILDGSGYRNGERVVLEDVQYVMLRNLVVRNSSHEGVLVTGGNNNTVSNLQMYANHYSGLTILNSSNNSLRYLISHDNYDGSGGGDSDGISISTGSGNRLSYCLVYRNSDDGVDTWRSTGTVVERCISIANGFQGGNGVGFKMGSPGYTVGTTVQFSIAHGNKTNGFDNNQANDVTFINNTSIGNEAYNYSVGNASSITNSLSVNGKVAIWTGASGDRVSSHHNSWDLGLSEGSLLSATDLSNPWYATLATGSPGRGVGVNGADLGALAYGSSIEKALGLILSDFLK*