ggKbase home page

scnpilot_solids1_trim150_scaffold_91_11

Organism: SCNPILOT_SOLID_1_TRIM150_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 16
Location: 7998..8273

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein HU n=3 Tax=Lactobacillus RepID=C0WTJ2_LACBU similarity UNIREF
DB: UNIREF100
  • Identity: 65.2
  • Coverage: 89.0
  • Bit_score: 119
  • Evalue 1.70e-24
DNA-binding protein HBsu {ECO:0000313|EMBL:GAF35402.1}; TaxID=1423743 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus farraginis DSM 18382 = JCM 14108.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.3
  • Coverage: 89.0
  • Bit_score: 121
  • Evalue 6.40e-25
nucleoid protein Hbs; K03530 DNA-binding protein HU-beta similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 89.0
  • Bit_score: 117
  • Evalue 2.70e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lactobacillus farraginis → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 276
ATGACCAAGTCCGAACTTATCGACAACGTCGCAACCCAAACCGGCCTCAGCAAGAAGGACGCGGGCGCAGCAATCAACGCCGCGCTCGACACCATCCAAGGCACCCTTGCTAAGGGTGACGCCGTCCAGATCACCGGCTTCGGCACCTTCGAAGTCCGCCAGCGCGCTGCCCGCGAAGGCGTCAAGCCCGGCACCAACGAGAAGATCCGGATCCCCGCCAGCAAGGCGCCCGCCTTCAAAGCCGGCAAGACCCTCAAGGACGCCGTCAACAACTAA
PROTEIN sequence
Length: 92
MTKSELIDNVATQTGLSKKDAGAAINAALDTIQGTLAKGDAVQITGFGTFEVRQRAAREGVKPGTNEKIRIPASKAPAFKAGKTLKDAVNN*