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scnpilot_solids1_trim150_scaffold_1613_5

Organism: SCNPILOT_SOLID_1_TRIM150_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 16
Location: 6473..7141

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase II subunit Rpb5b n=2 Tax=Giardia intestinalis RepID=E2RU93_GIAIC similarity UNIREF
DB: UNIREF100
  • Identity: 28.5
  • Coverage: 165.0
  • Bit_score: 75
  • Evalue 6.90e-11
RNA polymerase II subunit Rpb5b ; K03013 DNA-directed RNA polymerases I, II, and III subunit RPABC1 similarity KEGG
DB: KEGG
  • Identity: 28.5
  • Coverage: 165.0
  • Bit_score: 75
  • Evalue 2.20e-11
RNA polymerase II subunit Rpb5b {ECO:0000313|EMBL:EDO81649.1}; TaxID=184922 species="Eukaryota; Diplomonadida; Hexamitidae; Giardiinae; Giardia.;" source="Giardia intestinalis (strain ATCC 50803 / WB clone C6) (Giardia; lamblia).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 28.5
  • Coverage: 165.0
  • Bit_score: 75
  • Evalue 9.70e-11

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Taxonomy

Giardia intestinalis → Giardia → Eukaryota

Sequences

DNA sequence
Length: 669
ATGAGTCTTGTAAGTTATAAATTTGAGCCCTTTGAAGTTTACAAACATGTTCATGAAATGTTACCATATCGCGGAATGAAGGCTGAATCAGCAATGATGAATGAAACACAAGTCAAATCTACAGTGTCGCAAGAAGGATATGTTATGTTGAGTGCCGTGCCAGATCCCACAGCTACGCGTGAAGTTGACGGCAAGGTCATCAATCTAACACCTGTCACAAATGGTAAATTTATTGTAGTTATATTTAATATTAACAGCCGATATTTGGATAAAAGTGCTTCGATAGATTCAATCATGAAAGTTATATTAAAGCAAAAACCAATACAATTAATGTTTGTGCTACCACATGTCGAAATTAAAAAAGCTATTAGCGCCAAATTAGACACTTATGCAAAAACAAGCGAAATATATGTTGAAGTGCATGATTACAGCCGATTCATTATTCATTTTCCCAAACATGTATTTAGTCAACCTCATATAATCGCTGATAAGGCCGAAGTAAGTGAATATTGCACACGATATAAAACACATCAAAAATATTTTCCTAAAATCGTAGTAGGTGATGTTCAAGCGGTATGGATAGGCGCAAAAAATGGAGATGTTGTTAAAGTATTTAGAACAAGCGAAACATCAGGTAAACATATAGCTTATAGAATTTGCGAACGTTAG
PROTEIN sequence
Length: 223
MSLVSYKFEPFEVYKHVHEMLPYRGMKAESAMMNETQVKSTVSQEGYVMLSAVPDPTATREVDGKVINLTPVTNGKFIVVIFNINSRYLDKSASIDSIMKVILKQKPIQLMFVLPHVEIKKAISAKLDTYAKTSEIYVEVHDYSRFIIHFPKHVFSQPHIIADKAEVSEYCTRYKTHQKYFPKIVVGDVQAVWIGAKNGDVVKVFRTSETSGKHIAYRICER*