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scnpilot_solids1_trim150_scaffold_1557_7

Organism: SCNPILOT_SOLID_1_TRIM150_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 16
Location: comp(7723..8427)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Thellungiella salsuginea RepID=V4LHY3_THESL similarity UNIREF
DB: UNIREF100
  • Identity: 25.8
  • Coverage: 233.0
  • Bit_score: 76
  • Evalue 5.60e-11
DNA-directed RNA polymerase IV fifth largest subunit {ECO:0000313|EMBL:AJA90766.1}; TaxID=39583 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Gnetidae; Ephedrales; Ephedraceae; Ephedra.;" source="Ephedra trifurca.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 27.4
  • Coverage: 230.0
  • Bit_score: 77
  • Evalue 2.70e-11
DNA-directed RNA polymerase II subunit E similarity KEGG
DB: KEGG
  • Identity: 27.0
  • Coverage: 222.0
  • Bit_score: 72
  • Evalue 2.50e-10

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Taxonomy

Ephedra trifurca → Ephedra → Ephedrales → Gnetidae → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 705
ATGAATAATAGACAAAGCAATCTTTACAGATATTACACTGTCAAGAGAACACAGATTGAAATGCTGTATGATAGGGGTTATGATGTTTCTGCTGACATGCCATTCATGGAAATGGACATTGACCAATTTATTCAATACAGTAATGATGTAGTCAATGGTGGTCAAGCAATTAATGAAGCATTGTCTTCTGTTTACACTGAACAGAATGGTGAAACCAACTCTACTGCTATTGTCATTTTTTTACACAAGGACGCCAGAAAGACAACAGTATCAAAGGATATTGTTACAAAATTTAGTGATGATATTAGAGTTCAAGCTAGCAAGTATACTACTCCTCGAATTGAGATTATCATTATTGTTGACAGTGGCTTTAGTTCAGAAGCAGAAAAGGTGTTAAACGCATTAGATGGTACTGTCTTTGATGATTCAGTCTTGAGATTACAAATCTTTAAAGAGACAATGCTGACTTATAATCCTACAAAGTTTATTGATTATCGAGTGCATGAATTTATTGAAAAGGAGGAAGCAGATGCGATTATCAAGAAGATGGGTGTTAGCATTAGAGAACTTCCTGCATTGAAAGAAGATGATCCTGTATGTGCTTATTTTGGATGGAGAAAGGGTTCTTTGATTAGAATATACAGAGACGATCCATTGGACATTGCAGGAGCTAAGCATATCTATTATAGAAGTGTAATTGCTTGA
PROTEIN sequence
Length: 235
MNNRQSNLYRYYTVKRTQIEMLYDRGYDVSADMPFMEMDIDQFIQYSNDVVNGGQAINEALSSVYTEQNGETNSTAIVIFLHKDARKTTVSKDIVTKFSDDIRVQASKYTTPRIEIIIIVDSGFSSEAEKVLNALDGTVFDDSVLRLQIFKETMLTYNPTKFIDYRVHEFIEKEEADAIIKKMGVSIRELPALKEDDPVCAYFGWRKGSLIRIYRDDPLDIAGAKHIYYRSVIA*