ggKbase home page

scnpilot_solids1_trim150_scaffold_1815_4

Organism: SCNPILOT_SOLID_1_TRIM150_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 16
Location: comp(5509..7497)

Top 3 Functional Annotations

Value Algorithm Source
Secreted pectate lyase n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7VA09_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 43.9
  • Coverage: 396.0
  • Bit_score: 310
  • Evalue 5.00e-81
  • rbh
Secreted pectate lyase {ECO:0000313|EMBL:EPR66751.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.9
  • Coverage: 396.0
  • Bit_score: 310
  • Evalue 7.00e-81
pkd domain containing protein similarity KEGG
DB: KEGG
  • Identity: 29.0
  • Coverage: 696.0
  • Bit_score: 160
  • Evalue 2.60e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Cyclobacterium qasimii → Cyclobacterium → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1989
ATGCGTACAGCAATTTCAGCAAATAGAACCGCCAGCAGCGTGCTGGCACTGTTTCAACCGAAGTATCTGAAGGGGATTGCCATAATGGCGGCAATCGGACTATTAGCCGCGTGCGGACAGGTCACTAGCGTCCCTGGCGGCGATGAAACTCAGATCGAACCCACTTGGTCGTGGAGTCCGGTCGGCTACGTCGACGACACCGTTGGGACGGCCGCCGTCGACGACGCCCTCACGGTGCACGGCTCCGGAACGGACATCTGGGACGGCCGTGACGAGTTCTTCTACGTCTATACCAGCCTCGTCGGCGACGGCTCACTGTCGGTCAGGGTCAAGGACCTGCAGGCCGACAACCCGTGGGCGAAAGCTGGCGTCATGCTCCGTGAGAGCCTCGACCCAGACGCGCGCAACGTGCTCCTGCACATTTCCAGGGAGAACGGTTCGGTACTGCAGATGCGCCCTGAGACGGGCGGAGCAACCATCAACGATGCGGGGCACGACACGACCATGGCCGTGGGCGGCTGGGTGCGCCTCACCCGCACCGGCGACACCGTCCTTGGTGAGCTATCTCGCGACGGGGAGAGCTGGACCGAACTCGGCAAGTACGACATCGCTTTGGGCGACAACGCCCTCATCGGCTTCGCGGTGACTGCGCACGACCGCGGCAAGGTAGCGACGGCCGAGTTCACCAACGTGAGGCGCAACTGGCGCGGCGGTCCAGGCGCTAGGCCGGTCGTCAAACCAGAGCCGCCAGTGACTCAGCCGACCCCACAGCCCCCGGTCACTGACCCGACCCCGGTACCGCCCGTCCTCGGGGGCGCCGAGTACGACCTGCCGCCCGCTACCCTCTACGTGGCCACCAATGGCAACGACAGCAACTCGGGCCGCACCGCTAGCGCGCCGCTTAGAACCATGTCGAAGGCCACCTCCATGGTGCAGCCAGGTGACGTCGTTTACATTCGCGGAGGCGTCTACCCGATCAACGTCGCGTTCAGGACCCCTGGTACGGCGACCAAGCCCATCGTGTGGGCCTCTTACCCTGGCGAGACGGCGATCTTCGACGGCGCAGACCAGAGCCGTGGTAGCAGCCAGCACCGCGTGTGGGTCGACGGCGTGTCCTACAACCACTTCGTTAACTTCGAGGTTCGCAACAGCCCTCAGCAGGGCATATTCGTGCGAAACGCCAGCGATAACCTCTTCCACGGCCTCGTCGTCCACGGCAGCAACGGCAGCGGGATCCAGAACTACAGCGGCAACCGCAACCGTTACGAGTACCTAGTCACCTACGACAACTTCGACACCGTCAACTCCAACGGCAAGATCGGTGAGGACGCCGACGGCATCGGTATCTCAGCAGGTGACTCCAACGTCATCAGTCGCGTGATCAGCTACTACAACTCAGACGACGGCATAGACGCCTGGCGCTCCACGAACACCATCATCGAGCACTCCGTGGCGTTCGATAACGGGCGCGGCGCCAACGGCAACGGCAACGGCTTCAAGCTAGGCGGCAACAGCGAAGATAACCGTACGGTCGTGCGCTTCAATATCGCGTTCTCCAACAAGGCCTCCGGCTTCAGCCAGAACACCGGCCGCAACATCACCGTCTACAACAACACCGCGTATGGCAACTCTGGCCCCAACTACGACGTTGGCTCGACCGTCACGGTGCGCAACAACTTGTCCATCGGCGGCCGCAACAACGTGTTGAGCAGCGCGATCAGCGGCAACAACTCGTGGGACTTGGGCATCACCGACGTACGCGTACTGAGCACCGACCGCAATAGCCCCGACTTCCTCTCATTGCGCGCAGACAGCCCCGGAATTGACAGGGGTAGCGACGTCGGGTTGCCGTACCTCGGCGCGGCCCCGGACCTGGGTGCGCTCGAGTACCAAACGACGATCGCCGACCTGCTCGACTCCGAGCGGCTCCCGATCACCGAGATCGTCCGTGCGGCCATCGACTCGGCGACCTTGGCGCTAGCGCACTAG
PROTEIN sequence
Length: 663
MRTAISANRTASSVLALFQPKYLKGIAIMAAIGLLAACGQVTSVPGGDETQIEPTWSWSPVGYVDDTVGTAAVDDALTVHGSGTDIWDGRDEFFYVYTSLVGDGSLSVRVKDLQADNPWAKAGVMLRESLDPDARNVLLHISRENGSVLQMRPETGGATINDAGHDTTMAVGGWVRLTRTGDTVLGELSRDGESWTELGKYDIALGDNALIGFAVTAHDRGKVATAEFTNVRRNWRGGPGARPVVKPEPPVTQPTPQPPVTDPTPVPPVLGGAEYDLPPATLYVATNGNDSNSGRTASAPLRTMSKATSMVQPGDVVYIRGGVYPINVAFRTPGTATKPIVWASYPGETAIFDGADQSRGSSQHRVWVDGVSYNHFVNFEVRNSPQQGIFVRNASDNLFHGLVVHGSNGSGIQNYSGNRNRYEYLVTYDNFDTVNSNGKIGEDADGIGISAGDSNVISRVISYYNSDDGIDAWRSTNTIIEHSVAFDNGRGANGNGNGFKLGGNSEDNRTVVRFNIAFSNKASGFSQNTGRNITVYNNTAYGNSGPNYDVGSTVTVRNNLSIGGRNNVLSSAISGNNSWDLGITDVRVLSTDRNSPDFLSLRADSPGIDRGSDVGLPYLGAAPDLGALEYQTTIADLLDSERLPITEIVRAAIDSATLALAH*