ggKbase home page

scnpilot_solids1_trim150_scaffold_1840_2

Organism: SCNPILOT_SOLID_1_TRIM150_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 16
Location: 1478..2500

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix-domain containing protein AraC type n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X8D5_OCHA4 similarity UNIREF
DB: UNIREF100
  • Identity: 71.8
  • Coverage: 340.0
  • Bit_score: 489
  • Evalue 3.10e-135
  • rbh
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 71.8
  • Coverage: 340.0
  • Bit_score: 489
  • Evalue 9.70e-136
  • rbh
Helix-turn-helix-domain containing protein AraC type {ECO:0000313|EMBL:ABS17489.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.8
  • Coverage: 340.0
  • Bit_score: 489
  • Evalue 4.30e-135

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ochrobactrum anthropi → Ochrobactrum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1023
ATGGCCGCCGCGCGACAGCACCTTCCACGATCCGTGCTCGACACCAATCAGTTGCCGCAACGGCAGCGGGCGCCCCTGTGGCGGGACAGTGCGACGTCGGTCTGGGATGTGGAGCGTATCACCGACGACGGGTTCTACGCCTATGTCGACGCCTTTCAGGCGGGCGACCTGATGTTCGGCACGGTCAAAAGCTCGGGTCAGGCGACCGAGCGGACGCGCCTGCGCATCGCCTCGGACAGCCTCGACTACTATATGCTGCAGTTCTATGTGCGCGGGCAGCGCAGCGCGACCGCACGCGGGCACGAGGTGCTGGCGCAGAATGGCGATCTGCTGGTCGTCGACATGACCCAGCAACTTCAGACGCGATCAACCGAGTATCAGAGCTTCGATCTGGTTCTGCCCCGGCGGTTGTTCGACCCCCTGCTGGGCGATCCGGATGCGTTCGGCGGCGCCCTGTTCGCGTCGCAGCAGCCGCTGGTCGCCCTGCTCCGCAGCCACCTTCTGGCGCTCTACAAGGCCGGGCCGGACATGACGCAAGATCAGGCCATCGCCATGCAGGGGCCGACCTTGGCGCTGGCGGCGGCGGCCCTGAACGGAGCGGTTACAGAGGAAAAGGCCCAACCGGTGCGAACCGCCGCCTGGCTGGCGGTCCGACGGCATCTGGAAGACCGTCTGTCGGACCCCGAACTCAGCGCAGAGCGCGTGGCCCGGCACTTCGGTTTTTCACGCGCGACCCTTTATCGGATCATGGAGCCGGTCCACGGCTTTTCGGCCTATGTGCGCCTGCGTCGGCTGTATCGCTGTCGTGAAGACCTGGCGGACCGCGCCCAGCGCCACCGTTCGATCGCCGATATCGCCGCCCGGTGGGGATTTCACAACGCGGCGGCTTTCAGCGCCTTTTTTTCGAGAACCTTCGGCCTGCCGCCGCGTGACTATCGGCAGATGGCCTTCGGTCAGGAATTGGGCGCGACCCATTCGGCATCCGAACTTGACTGGAGCCGCTGGCTGTCAGCGATGCGATAA
PROTEIN sequence
Length: 341
MAAARQHLPRSVLDTNQLPQRQRAPLWRDSATSVWDVERITDDGFYAYVDAFQAGDLMFGTVKSSGQATERTRLRIASDSLDYYMLQFYVRGQRSATARGHEVLAQNGDLLVVDMTQQLQTRSTEYQSFDLVLPRRLFDPLLGDPDAFGGALFASQQPLVALLRSHLLALYKAGPDMTQDQAIAMQGPTLALAAAALNGAVTEEKAQPVRTAAWLAVRRHLEDRLSDPELSAERVARHFGFSRATLYRIMEPVHGFSAYVRLRRLYRCREDLADRAQRHRSIADIAARWGFHNAAAFSAFFSRTFGLPPRDYRQMAFGQELGATHSASELDWSRWLSAMR*