ggKbase home page

scnpilot_solids1_trim150_scaffold_1166_7

Organism: SCNPILOT_SOLID_1_TRIM150_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 16
Location: comp(4858..5199)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega n=1 Tax=Segetibacter koreensis RepID=UPI000382E9B0 similarity UNIREF
DB: UNIREF100
  • Identity: 78.8
  • Coverage: 113.0
  • Bit_score: 184
  • Evalue 5.40e-44
DNA-directed RNA polymerase subunit omega {ECO:0000313|EMBL:KIC89392.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.3
  • Coverage: 113.0
  • Bit_score: 177
  • Evalue 9.30e-42
DNA-directed RNA polymerase subunit omega similarity KEGG
DB: KEGG
  • Identity: 72.6
  • Coverage: 113.0
  • Bit_score: 171
  • Evalue 1.90e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavihumibacter sp. ZG627 → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 342
ATGAACAAATTACGTCGTCAACAAACAGCTAATATTCCAAGTGTAATTGAAACTAAAAACCTTGTGGACATTAAGGATAAGACGGGCAACCTATACGAATCTGTGGTTATTATAGCAAAAAGGGCTAACCAGATTAGTATCAATATTAAAGAAGAATTGCACGAGAAACTGGAAGAGTTTGCTACTCATACAGACAGCCTGGAAGAAATTCATGAAAACAAAGAGCAAATAGAAATTTCAAAAGCATTTGAAAAATTGCCAAATCCGGCTATTCTTGCTACCTATGAATTTATGGAGGATAAGATTTATTTCCGTAAAAACGAGGATAATCTGTTTGCATAG
PROTEIN sequence
Length: 114
MNKLRRQQTANIPSVIETKNLVDIKDKTGNLYESVVIIAKRANQISINIKEELHEKLEEFATHTDSLEEIHENKEQIEISKAFEKLPNPAILATYEFMEDKIYFRKNEDNLFA*