ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_solids1_trim150_scaffold_1171_22

Organism: SCNPILOT_SOLID_1_TRIM150_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 16
Location: 11305..12936

Top 3 Functional Annotations

Value Algorithm Source
C-5 cytosine-specific DNA methylase; K00558 DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37] similarity KEGG
DB: KEGG
  • Identity: 58.9
  • Coverage: 489.0
  • Bit_score: 549
  • Evalue 9.60e-154
  • rbh
hypothetical protein n=2 Tax=Rhizobium meliloti RepID=UPI000363E2BC similarity UNIREF
DB: UNIREF100
  • Identity: 61.9
  • Coverage: 582.0
  • Bit_score: 681
  • Evalue 8.80e-193
  • rbh
Putative C-5 cytosine-specific DNA methylase {ECO:0000313|EMBL:KGJ69995.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 540.0
  • Bit_score: 681
  • Evalue 1.20e-192

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium diazoefficiens → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1632
GTGAGCCGTCGCAAAATTCTTGTTGCCGATCTTCTCTGCGGCGCTGGTGGCTCGTCCACGGGATGTGCGCGGGCACTGGATGAGCTTGGTCTGGAGATGGAACTTGTCTGTGTGAATCACTGGCCGGTGGCTATTGAGACCCACAGGATCAATCATCCCGAAGCACGTCATTATGTGCAGGATATCGCCACGGTACGGCCGCATCTGATCGTGCCGGAAGGCTATCTCGATCTTTTGATGGCATCGCCCACCTGCACGCATCATTCGGTTGCGCGGGGTGGAAAACCCACCAGCGACCAGCAGCGCAGCGATCCGTGGCACATCATAACCTGGCTCACCGAACTGCGGGTCAAACGGATCGTCATTGAGAATGTCTGGGAATTTATCGGTTGGGGTCCAGTCGATCGGAGAACGGGCAGACCGATCAAATCGCGCAAGGGCGAGTATTTCCATGCGTGGATCGACACAATTCGTCGGATAGGCTTCGAGCCAGAGTGGCGGAAGCTGAACGCGGCCAATTATGGCGATGCTACCACGCGCCAGCGTTTCATCCTGAAAGCACGGAATGACCGCAAAGTGGTGCGGTGGGCACCCATCACGCACGGGAAGGCGGAAGACGATATTCTGCTATTCCCCAGCTTGAAACCATGGCGGCCGGCGCGGGAGATCATTGACTGGTCGATCAAAGGCAAATCCATTTTTCATCGACCCAAGTCCCTCGCGCCGAAGACTCTGGCACGCATCTATGCTGGCGCGGTGAAGTTCAAATGGCCCGAGCCCTATCTTGTCATCCTGCGCAACCATATGGCCGCGCAAAGCCTTGATGAGCCGCTGCCGACCATCGCGGCGAACGGCACGCATATTGGAATTGCCGAGCCGATTGTACTTTCGCAGCACAATAGCGGCGCAGCCCGAACCGTGGGTGAGCCATTGCCTACGATCACAACCGGCGGGGCTGGCGCGGAAAAACATGAAGGGTGTGCCAGGCCGATGCTGGTCGAGCCGTTCGTGCTTTCCCGGCAGACCTGTGGTGCGCTGCGATCGGTAGACGAACCCATCCCGACGCAGACATCGGTCCACTCCCCAGTCCTGATATCGCCATACTATGGGTCTGGGTCTGGGGAGACATGTCAGAGCGCCGATAAGCCGCTGCCTACGGTCACCGCAAAGGCCCGTTTCGGCATTGTCATTCCCGTGACGCATGGCGGCGGCGAGACTCGCGCTACCGACGTCAATGATCCCCTGCCGACCGTGACCGGCGCCAATCGCGGTGAACTGGCCTTCGTCACCGCGCAATTCGGGGAGAGGGAAGGGCAGGCGCCGCGCACGCACAGCCTGGATCAACCGGCCTCCACCGGAATGACGCTGGGAAACGGCGCGCTGATCGAAGGCACAGAGGAATACGACATCCTGTTTCGGATGCTGGAACCGCATGAGCTGGCCGGAGCGATGGGCTTTACCACCGAAGATCATGCCTACCAGTTTGCGGGCACAAAAACCCAGAAGATCAAGCAGATCGGCAATGCGGTTTCGGTCGCGATGATGAAGGCTGAGGTCAAAGCGATCATGGCCGACGCTGCTCCGAAGAAGAAACAATCACATGAATTCGAACTTGGCGAGGCCGCGGCATGA
PROTEIN sequence
Length: 544
VSRRKILVADLLCGAGGSSTGCARALDELGLEMELVCVNHWPVAIETHRINHPEARHYVQDIATVRPHLIVPEGYLDLLMASPTCTHHSVARGGKPTSDQQRSDPWHIITWLTELRVKRIVIENVWEFIGWGPVDRRTGRPIKSRKGEYFHAWIDTIRRIGFEPEWRKLNAANYGDATTRQRFILKARNDRKVVRWAPITHGKAEDDILLFPSLKPWRPAREIIDWSIKGKSIFHRPKSLAPKTLARIYAGAVKFKWPEPYLVILRNHMAAQSLDEPLPTIAANGTHIGIAEPIVLSQHNSGAARTVGEPLPTITTGGAGAEKHEGCARPMLVEPFVLSRQTCGALRSVDEPIPTQTSVHSPVLISPYYGSGSGETCQSADKPLPTVTAKARFGIVIPVTHGGGETRATDVNDPLPTVTGANRGELAFVTAQFGEREGQAPRTHSLDQPASTGMTLGNGALIEGTEEYDILFRMLEPHELAGAMGFTTEDHAYQFAGTKTQKIKQIGNAVSVAMMKAEVKAIMADAAPKKKQSHEFELGEAAA*