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scnpilot_solids1_trim150_scaffold_2488_3

Organism: SCNPILOT_SOLID_1_TRIM150_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 16
Location: 4672..8268

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 999.99
  • Bit_score: 2360
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 96.2
  • Coverage: 999.99
  • Bit_score: 2293
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta' n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAF4_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 999.99
  • Bit_score: 2360
  • Evalue 0.0
  • rbh

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3597
ATGAACCAAGAGATTATGAATCTTTTCAACCCGACGACGCCGGCCCAGGTCTTCGACCAGATCCGGATTTCGATTGCGTCGCCGGAGAAGATTCTGTCGTGGTCGTACGGCGAAATCAAAAAGCCGGAAACCATCAACTACCGCACGTTCAAGCCCGAGCGTGATGGCCTGTTCTGTGCGCGCATCTTTGGGCCGATCAAGGACTACGAGTGCTTGTGCGGCAAGTACAAGCGGATGAAGTACAAGGGCATCATTTGCGAAAAGTGCTCGGTTGAAGTCACGCTGTCGCGCGTCCGCCGCGAGCGCATGGGTCACATTGAATTGGCTGCGCCGGTTGCGCACATCTGGTTCCTGAAGTCGCTGCCGAGCCGCATCGGCCTTCTGCTCGACATGACGTTGAAGGACCTCGAGCGGATTCTGTACTTCGAGTACTACGTCGTGCTTGAGCCGGGCCTCACCGCGCTCAAGGACCGTCAGTTGCTGTCCGAAGAGGAATATCTGAAGGCGCAGGACGAGTACGGCCAGGATTCGTTCACCGCGATGATCGGTGCGGAAGCTATCCGCGAACTGCTGCGGGGCCTCGACCTCGAGAAGCTCGAAGCGCAGCTGCGCGCCGACATGGCGGAGACCGATAGCGATATCAAGCACAAGAAGTTCGCCAAGCGGCTGAAGATCGTCGAAGCCTTCCGCCATTCCGGCAACAAGCCGGAGTGGATGATCATGACGGTGGTGCCGGTGATTCCGCCGGATTTGCGCCCGCTGGTGCCGCTCGACGGCGGTCGCTTCGCGACGTCGGACCTCAATGACCTGTATCGTCGCGTCATCAATCGCAACAACCGTCTGAAGCGGCTGATGGAGCTGCGCGCGCCGGACATCATCATCCGCAACGAAAAGCGCATGCTGCAGGAAGCTGTGGACGCGCTGTTCGACAACGGCCGCCGTGGCCGCGTCATCACTGGCGCCAACAAGAGGCCTTTGAAGTCGCTCGCCGACATGCTCAAGGGCAAGCAGGGCCGTTTCCGCCAGAACCTGCTCGGCAAGCGCGTCGACTATTCGGGCCGTTCGGTCATCGTGGTCGGCCCCGAACTGAAACTGCATCAGTGCGGCCTGCCGAAGAAGATGGCGCTCGAATTGTTCAAGCCGTTCATCTACTCGCGGCTCGACGCCAAGGGGCTGTCCACCACCGTGAAGCAGGCGAAGAAGCTCGTCGAGAAGGAGCGCCCCGAAGTCTGGGATATCCTCGATGAGGTGATCCGCGAGCATCCGGTGCTCCTGAACCGCGCGCCGACGCTGCACCGCCTCGGCATTCAGGCGTTCGAGCCGACGCTGATCGAGGGCAAGGCGATCCAGCTTCACCCGCTGGTCTGCGCCGCGTTCAACGCCGACTTCGACGGCGACCAGATGGCCGTGCACGTTCCGCTGTCGCTCGAAGCGCAGCTCGAAGCGCGCGTCCTGATGATGTCGACCAATAATATCCTGCACCCGGCGAACGGCCAGCCGATCATCGTGCCGTCGCAGGACATCGTGCTTGGTCTTTATTATCTCTCGATCCTGCGCGAAGGCCTTGCCGGTGAAGGCAAGGTCTACCGCGACATGGCGGAGATCGAGCACGCGCTATTCTCCAAGGTCATCCATCTGCACACCAAGATCAAGTATCGGTGGAACGGTGTCGGCGAAGGTAACAAGCCGATCTCGAAGATTTATGAGACCACCGCCGGCCGCGTCATGCTCGGCCAGGTTCTGCCGAAACATCCGAAGGTGCCGTTCGACGCCGTCAACAAGCTGATGACGAAGCGCGAAATCTCCGGCGTGATCGATACGGTGTATCGTCACTGCGGTCAGAAGGAGACGGTGATCTTCTGCGACCGCATCATGGCGCTCGGCTTCCACAACGCCTTTAAGGCAGGCATCTCGTTCGGCAAGGACGACATGGTTGTGCCGCACGGCAAGTGGAAGGTCGTAGACGATACCCGCTCGATGGCGAAGGAATTCGAGCAGCAGTACAATGACGGCCTGATCACTCAGGGCGAGAAGTACAACAAGGTCGTCGACGCCTGGTCCAAGGCCACGGAGAAGATCGCCGAGGAGATGATGAAGGAAATCTCTTCGGTGAAGAAGAATCCGAAGGGCGGCGAAGCTCAGATCAACTCGATCTACATGATGGCTCACTCCGGTGCGCGTGGCTCGCCGGCGCAGATGCGGCAGTTGGCCGGCATGCGCGGCCTGATGGCCAAGCCGTCGGGCGAGATCATCGAGACGCCGATCATTTCCAACTTCAAGGAAGGCCTGTCGGTTCTCGAATACTTCAACTCGACCCACGGCGCCCGCAAGGGCCTTGCGGACACCGCGTTGAAGACCGCAAACTCCGGTTATCTCACCCGCCGTCTGGTCGACGTGGCGCAGGACTGCATCATCAATGCAACCGACTGCGGCACCAACCTCGGCATCAAGATGCGGGCGATCGTGGACGCCGGTACCGTGGTGGCCTCGCTTGGCTCCCGCATCCTTGGCCGCACCGCGGGCGAGGATATTCGCGAGCCGTCCACCAACAGGGTCATCGTCAAGCGTGGCACTCTGATGGAGGAGAGCCACGTCGATGCCATCCAGCGCGCTGGTGTGCAGGAGGTGAAGATCCGCTCCGCACTCACCTGCGAACTGGTCAACGGCATCTGCGCCATGTGCTACGGCCGCGACCTCGCGCGCGGCACTCCGGTCAACCACGGTGAAGCTGTCGGCGTCATCGCCGCGCAGTCGATCGGCGAGCCGGGCACGCAGCTCACGATGCGTACGTTCCACATCGGTGGCGCTGCGCAGATCAACCAGCAGTCGTTTGTCGAGTCGAATTTCGACGGCAAGATCGTCATCAGGAACAAGGCGATCGCCACCAACTCGGAAGGCGCCAGGGTCGCGATGGTCCGCAACATGGTTGTTGCGATCGTCGATGCCGACGGCACCGAGCGTGCGACCCATCGTATCCAGTACGGCTCGCGGATGTGGGTCGACGAGGGCGATATGGTCAAGCGCGGCCAGCGCATCGCGGAGTGGGACCCCTATACCCGTCCCATTCTCACCGAAGTCGAGGGCACCATCGGGTTTGAGGATCTGGTCGAAGGTCAGTCGATCTCCGAAACGCTCGACGAGTCGACCGGTATCGCCAAGCGCATCGTCATCGACTGGCGCTCGACCAACCGTGGCGCGGACCTGCGCCCGGCGATTGTGGTCAAGGGCAAGGATGGCAAGGTATTGAAGCTCGCGCGTGGCGGCGACGCTCGCTACATGCTGTCGGTTGACGCCATTCTGTCGGTGGACGTCGGCGCGACGGTGAAGCCGGGTGATATCCTTGCGCGTATCTCGACCGAGAGCGCCAAGACCCGCGACATCACGGGCGGTCTGCCGCGCGTTGCTGAACTGTTCGAAGCCCGCAAGCCGAAGGACGCCGCGATCATCGCGGAGATCGCCGGCACCATCCGCTTCGGACGCGACTACAAGAACAAGCGCCGCATCTCGATCGAGCCTGTCGACAAGACTGAGGAGCCGCGCGAGTACCTGATTCCGAAGGGCAAGCACATCCACCTGCAGGACGGCGACATCGTCGAA
PROTEIN sequence
Length: 1199
MNQEIMNLFNPTTPAQVFDQIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCARIFGPIKDYECLCGKYKRMKYKGIICEKCSVEVTLSRVRRERMGHIELAAPVAHIWFLKSLPSRIGLLLDMTLKDLERILYFEYYVVLEPGLTALKDRQLLSEEEYLKAQDEYGQDSFTAMIGAEAIRELLRGLDLEKLEAQLRADMAETDSDIKHKKFAKRLKIVEAFRHSGNKPEWMIMTVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIIRNEKRMLQEAVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCGLPKKMALELFKPFIYSRLDAKGLSTTVKQAKKLVEKERPEVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPTLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQLEARVLMMSTNNILHPANGQPIIVPSQDIVLGLYYLSILREGLAGEGKVYRDMAEIEHALFSKVIHLHTKIKYRWNGVGEGNKPISKIYETTAGRVMLGQVLPKHPKVPFDAVNKLMTKREISGVIDTVYRHCGQKETVIFCDRIMALGFHNAFKAGISFGKDDMVVPHGKWKVVDDTRSMAKEFEQQYNDGLITQGEKYNKVVDAWSKATEKIAEEMMKEISSVKKNPKGGEAQINSIYMMAHSGARGSPAQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLSVLEYFNSTHGARKGLADTALKTANSGYLTRRLVDVAQDCIINATDCGTNLGIKMRAIVDAGTVVASLGSRILGRTAGEDIREPSTNRVIVKRGTLMEESHVDAIQRAGVQEVKIRSALTCELVNGICAMCYGRDLARGTPVNHGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQINQQSFVESNFDGKIVIRNKAIATNSEGARVAMVRNMVVAIVDADGTERATHRIQYGSRMWVDEGDMVKRGQRIAEWDPYTRPILTEVEGTIGFEDLVEGQSISETLDESTGIAKRIVIDWRSTNRGADLRPAIVVKGKDGKVLKLARGGDARYMLSVDAILSVDVGATVKPGDILARISTESAKTRDITGGLPRVAELFEARKPKDAAIIAEIAGTIRFGRDYKNKRRISIEPVDKTEEPREYLIPKGKHIHLQDGDIVE