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scnpilot_solids1_trim150_scaffold_7510_3

Organism: SCNPILOT_SOLID_1_TRIM150_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 16
Location: comp(3206..4330)

Top 3 Functional Annotations

Value Algorithm Source
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] id=12493505 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 370.0
  • Bit_score: 751
  • Evalue 3.60e-214
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] similarity KEGG
DB: KEGG
  • Identity: 83.8
  • Coverage: 358.0
  • Bit_score: 625
  • Evalue 1.20e-176
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 358.0
  • Bit_score: 625
  • Evalue 5.50e-176

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1125
ATGCCGTTCTTTCCCCCTTCCTCCCCGCCTTCCGGCCACCGCCAGTCCGGCCTTGCCGGCGCGGCCGACGCGCTGTACCTGGCCGAACTGGCGCATACCACCGCACCGCTGGCGGTGGTATGCGCCAACGCGTGGGACGCCAACCGGCTGGCCGAGGAACTGCGCTGGTTCGATCCGGCATTGCGGGTATGCGCGTTCCCCGACTGGGAAACCCTGCCCTACGACACGTTTTCACCACACCCGGATCTGATTTCCGAGCGGCTGGCGAGCCTGTATCAGATTTCGCGCGGCGAGTTCGATGTGGCCGTGGTCACGCTCTCGACCGCACTGTACCGGCTGGCGCCGCCGGCTTTTCTTGCCGCCCACACATTCTTCCTGAAGCAGAAGGACACGCTGGACGAAGCGGCCTTCCGTGCCCAGATGACTCTGGGCGGCTACACCCATGTGAACCAGGTCTTCGCACCGGGTGAATTCTCGATCCGCGGCGGCTTGATCGATCTCTTTCCCATGGGCAGCGCCCTGCCTTATCGCATCGACCTGTTCGACAATGAGATTGAGACCCTGCGGGCATTCGACGTCGATACCCAGCGCAGCATCTATCCTGTCGACGAAGTGCGGCTGCTGCCTGCGCGCGAGTTTCCGTTCGACGAGGCCGGGATCACCCGCTTCCGCCAGAATTTTCGCGAGCGTTTCGAGGGCGATCCGTCCAGGTCCAAGCTCTACAAGGATGTCAGCAACCGCCTGGCGCCGGCCGGAATCGAGTACTACCTGCCGCTGTTTTTTGATGAAACGGCCACGCTGTTCGACTATCTGCCCAAGAATACCCGTTTCGTCAGCCACGGCGCCCTCGACCCGGCCGGGCAGGCCTTCTGGGCCGATGCGCAGGGCCGCTATCGCCTGCTGTCGGGCGACAAGGATCGCCCGTTGCTGCCGCCCGTCGACCTGTTCCTGCCGACCGACGCGTTCTTCAGTCTGTCCAAAGGCTACGCGCGGCTCGACCTGGAACAGACCGGCGAGGGACTGGCCCACCCGGTGCCCCCCATTGCGGTCGATCGCCGCGAAGCCCGGCCGGTTGCCAGGCTGCAAGGATTCATTGACGCATTCCAGGGGATCTGTCCGAACTGA
PROTEIN sequence
Length: 375
MPFFPPSSPPSGHRQSGLAGAADALYLAELAHTTAPLAVVCANAWDANRLAEELRWFDPALRVCAFPDWETLPYDTFSPHPDLISERLASLYQISRGEFDVAVVTLSTALYRLAPPAFLAAHTFFLKQKDTLDEAAFRAQMTLGGYTHVNQVFAPGEFSIRGGLIDLFPMGSALPYRIDLFDNEIETLRAFDVDTQRSIYPVDEVRLLPAREFPFDEAGITRFRQNFRERFEGDPSRSKLYKDVSNRLAPAGIEYYLPLFFDETATLFDYLPKNTRFVSHGALDPAGQAFWADAQGRYRLLSGDKDRPLLPPVDLFLPTDAFFSLSKGYARLDLEQTGEGLAHPVPPIAVDRREARPVARLQGFIDAFQGICPN*