ggKbase home page

scnpilot_solids1_trim150_scaffold_55917_3

Organism: SCNPILOT_SOLID_1_TRIM150_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 16
Location: 1224..1517

Top 3 Functional Annotations

Value Algorithm Source
IS3 family transposase n=1 Tax=Agrobacterium sp. (strain H13-3) RepID=F0LB68_AGRSH similarity UNIREF
DB: UNIREF100
  • Identity: 64.8
  • Coverage: 88.0
  • Bit_score: 125
  • Evalue 3.30e-26
Transposase IS3 {ECO:0000313|EMBL:KFD40047.1}; TaxID=1453500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Schleiferiaceae; Schleiferia.;" source="Schleiferia thermophila str. Yellowstone.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.6
  • Coverage: 88.0
  • Bit_score: 133
  • Evalue 1.30e-28
IS3 family transposase similarity KEGG
DB: KEGG
  • Identity: 64.8
  • Coverage: 88.0
  • Bit_score: 125
  • Evalue 1.10e-26

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Schleiferia thermophila → Schleiferia → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 294
ATGAAAAAAGTACGATTCACCGAAACACAAATCATTTCGATTTTAAAGAAACAAGAAGCGGGCATATCCATCAGGGATATTGCACGCGAGCATGGCATCAGCGAAGCCACGTTTTACAACTGGAAAGCAAAGTATGGTGGCATGGAGGCCAATGAGATCAAGCGGATGAAAGAACTGGAAGAAGAAAATGCCCGTTTGAAACGCATTGTTGCTAACCAGATGTTGGAGATTGACGCTATTAAACATGTGCTGGAAAAAAAGTTCGGCGGCCTGTCGACAAGCGGGAAGCAGTGA
PROTEIN sequence
Length: 98
MKKVRFTETQIISILKKQEAGISIRDIAREHGISEATFYNWKAKYGGMEANEIKRMKELEEENARLKRIVANQMLEIDAIKHVLEKKFGGLSTSGKQ*