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SCNPILOT_SOLID_1_TRIM150_UNK

In projects: SCNPILOT_SOLID_1_TRIM150

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 26.46 Longest contig: 777.41 Kbp Bin length: 77.02 Mbp GC content: 57.82 %

Contigs count: 31163 Features count: 97682 rRNAs count: 33 tRNAs count: 973

Genome completeness

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 16

Displaying items 31151-31163 of 31163 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
scnpilot_solids1_trim150_scaffold_20565 Order: Sphingomonadales (50%)	4	1727 bp	67.34	4.00	110.31
scnpilot_solids1_trim150_scaffold_33241 Phylum: Bacteroidetes (66.67%)	3	1222 bp	36.09	2.21	110.48
scnpilot_solids1_trim150_scaffold_101086 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1278 bp	67.14	71.71	110.56
scnpilot_solids1_trim150_scaffold_39016 Species: Phenylobacterium zucineum (50%)	2	1088 bp	58.00	7.72	110.57
scnpilot_solids1_trim150_scaffold_25201 Class: Betaproteobacteria (66.67%)	3	1494 bp	73.36	6.93	110.64
scnpilot_solids1_trim150_scaffold_28580 Species: Candidatus Amoebophilus asiaticus (50%)	2	1363 bp	36.61	5.28	111.15
scnpilot_solids1_trim150_scaffold_39571 Species: Stenotrophomonas maltophilia (50%)	4	1076 bp	63.85	2.79	111.52
scnpilot_solids1_trim150_scaffold_38818	4	1092 bp	55.77	7.01	112.36
scnpilot_solids1_trim150_scaffold_40330 Species: Aspergillus fumigatus (50%)	2	1060 bp	60.19	2.41	112.64
scnpilot_solids1_trim150_scaffold_27984	4	1384 bp	59.75	3.36	112.72
scnpilot_solids1_trim150_scaffold_70827 Species: Xanthomonas oryzae (50%)	2	1168 bp	64.90	143.58	114.81
scnpilot_solids1_trim150_scaffold_42243 Species: R_OP11_Gottesmanbacteria_42_22 (50%)	2	1025 bp	61.37	6.59	116.49
scnpilot_solids1_trim150_scaffold_41649 Species: Comamonas testosteroni (50%)	2	1035 bp	66.96	5.51	118.84

Displaying items 31151-31163 of 31163 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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